Neohecogenin 3-O-beta-D-glucopyranosyl-(1→3)-[beta-D-xylopyranosyl-(1→3)-beta-D-xylopyranosyl-(1→2)]-beta-D-glucopyranosyl-(1→4)-beta-D-galacto-pyranoside - Compound Card

Neohecogenin 3-O-beta-D-glucopyranosyl-(1→3)-[beta-D-xylopyranosyl-(1→3)-beta-D-xylopyranosyl-(1→2)]-beta-D-glucopyranosyl-(1→4)-beta-D-galacto-pyranoside

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Neohecogenin 3-O-beta-D-glucopyranosyl-(1→3)-[beta-D-xylopyranosyl-(1→3)-beta-D-xylopyranosyl-(1→2)]-beta-D-glucopyranosyl-(1→4)-beta-D-galacto-pyranoside

Structure
Zoomed Structure
  • Family: Plantae - Agavaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Spirostanol Saponin
Canonical Smiles OCC1O[C@@H](O[C@]2(O)C(CO)O[C@H]([C@H](C2O)O)OC2CCC3([C@H](C2)CCC2C3CC(=O)C3(C2CC2C3C(C)C3(O2)CCC(CO3)C)C)C)[C@H](C([C@H]1O)O[C@@H]1OC(CO)[C@@H](C([C@@H]1O)O)O)OC1OC[C@H]([C@@H]([C@H]1O)OC1OC[C@H]([C@@H]([C@H]1O)O)O)O
InChI InChI=1S/C55H88O28/c1-20-7-10-54(74-17-20)21(2)34-29(82-54)12-26-24-6-5-22-11-23(8-9-52(22,3)25(24)13-32(61)53(26,34)4)75-50-42(69)46(70)55(71,33(16-58)78-50)83-51-45(44(37(64)31(15-57)77-51)80-49-40(67)38(65)36(63)30(14-56)76-49)81-48-41(68)43(28(60)19-73-48)79-47-39(66)35(62)27(59)18-72-47/h20-31,33-51,56-60,62-71H,5-19H2,1-4H3/t20?,21?,22-,23?,24?,25?,26?,27+,28+,29?,30?,31?,33?,34?,35-,36-,37-,38?,39+,40-,41+,42-,43-,44?,45-,46?,47?,48?,49-,50+,51-,52?,53?,54?,55+/m0/s1
InChIKey GHMRILAKANAPCR-UCJXFYMRSA-N
Formula C55H88O28
HBA 28
HBD 15
MW 1197.28
Rotatable Bonds 13
TPSA 431.28
LogP -5.31
Number Rings 11
Number Aromatic Rings 0
Heavy Atom Count 83
Formal Charge 0
Fraction CSP3 0.98
Exact Mass 1196.55
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Agave decipiens Agavaceae Plantae 2695036

Showing of synonyms

  • Abdel-Gawad MM, El-Sayed MM and Abdel-Hameed ES. (1999). Molluscicidal steroidal saponins and lipid content of Agave decipiens. Fitoterapia,1999,70,371-381. [View]
Pubchem: 162913874
Nmrshiftdb2: 60019328

No compound-protein relationship available.

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CC(CC6)OC(OC7)CCC7OC8OCCC(OC9CCCCO9)C8OC(OCC1)CC1OC1CCCCO1

Level: 5

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CC(CC6)OC(OC7)CCC7OC8OCCC(OC9CCCCO9)C8OC1CCCCO1

Level: 4

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CC(CC6)OC(OC7)CCC7OC(OCCC8)C8OC(OCC9)CC9OC1CCCCO1

Level: 4

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC1OC2CC(OCC2)OC3C(OC4CCCCO4)CCOC3OC5CCCOC5

Level: 4

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CC(CC6)OC(OC7)CCC7OC(OCCC8)C8OC9CCCCO9

Level: 3

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CC(CC6)OC(OC7)CCC7OC(OCC8)CC8OC9CCCCO9

Level: 3

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC1OC2C(OC3CCCCO3)CCOC2OC4CCCOC4

Level: 3

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC1OC2C(COCC2)OC(OCC3)CC3OC4CCCCO4

Level: 3

Mol. Weight: 1197.28 g/mol

Structure

SMILES: C1OCCCC1OC(OCCC2)C2OC(OCC3)CC3OC4CCCCO4

Level: 3

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CC(CC6)OC(OC7)CCC7OC8CCCCO8

Level: 2

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC1OC2CC(OCC2)OC3CCCOC3

Level: 2

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC1OC2C(OCCC2)OC3CCCOC3

Level: 2

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC1OC2C(COCC2)OC3CCCCO3

Level: 2

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CC(CC6)OC7CCCCO7

Level: 1

Mol. Weight: 1197.28 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 1197.28 g/mol

Structure

SMILES: C1COCCC1OC2CCCCO2

Level: 1

Mol. Weight: 1197.28 g/mol

Structure

SMILES: O1CCCCC12CC3C4C(CC3O2)C5C(CC4=O)C6C(CC5)CCCC6

Level: 0

Mol. Weight: 1197.28 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 1197.28 g/mol

Molluscicidal

Absorption

Caco-2 (logPapp)
-6.67
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
186058499.8
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
24315670387.2

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.64
Plasma Protein Binding
21.29
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
0.62
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-565527426.61
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-231.09
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Toxic
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-44131771792167.08
Rat (Acute)
4.14
Rat (Chronic Oral)
94657.91
Fathead Minnow
55706961411.87
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
4963600585848.18
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-2759261.28
Log(P)
-322.57
Log S
-1.41
Log(Vapor Pressure)
-163448842200.22
Melting Point
-46568.07
pKa Acid
-1190983103.76
pKa Basic
-9581406.32
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8465
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8465
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7952
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7952
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7920
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7920
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.7854
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.7854
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7752
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7752
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7741
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7741
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 4 0.7660
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 4 0.7660
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7648
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7648
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7578
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7578
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7554
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7554
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7486
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7486
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 2 0.7445
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 2 0.7445
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7393
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7393
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7393
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7393
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7392
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7392
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7340
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7340
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7162
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7162
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 2 0.7149
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 2 0.7149
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7148
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7148
4,4'-diapophytoene synthase A9JQL9 CRTM_STAAU Staphylococcus aureus 2 0.7126
4,4'-diapophytoene synthase A9JQL9 CRTM_STAAU Staphylococcus aureus 2 0.7126
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7124
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7124
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7115
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7115
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7083
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7083
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7060
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7060

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