Trochelioid B - Compound Card

Trochelioid B

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Trochelioid B

Structure
Zoomed Structure
  • Family: Animalia - Alcyoniidae
  • Kingdom: Animalia
  • Class: Terpenoid
    • Subclass: Cembranoid Diterpene
Canonical Smiles CO[C@]1(C)CC/C=C(\C)/CCC2=C(C(=O)O[C@H]2/C=C(/CC[C@H]1O)\C)C
InChI InChI=1S/C21H32O4/c1-14-7-6-12-21(4,24-5)19(22)11-9-15(2)13-18-17(10-8-14)16(3)20(23)25-18/h7,13,18-19,22H,6,8-12H2,1-5H3/b14-7+,15-13+/t18-,19+,21+/m0/s1
InChIKey OGDIPDDKOOVFTL-LFDXQZSNSA-N
Formula C21H32O4
HBA 4
HBD 1
MW 348.48
Rotatable Bonds 1
TPSA 55.76
LogP 4.24
Number Rings 2
Number Aromatic Rings 0
Heavy Atom Count 25
Formal Charge 0
Fraction CSP3 0.67
Exact Mass 348.23
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Sarcophyton trocheliophorum Alcyoniidae Animalia 205097

Showing of synonyms

  • Hegazy M-EF, Mohamed TA, et al. (2013). Trochelioid A and B, new cembranoid diterpenes from the Red Sea soft coral Sarcophyton trocheliophorum. Phytochemistry Letters,2013,6,383-386. [View]
Pubchem: 102442820
Nmrshiftdb2: 70053354

No compound-protein relationship available.

Structure

SMILES: C1C(=O)OC(C=12)C=CCCCCCCC=CCC2

Level: 0

Mol. Weight: 348.48 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.8
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.340
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.94

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.620
Plasma Protein Binding
59.07
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.560
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.270
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.030
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.460
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1.800
Rat (Acute)
2.090
Rat (Chronic Oral)
1.890
Fathead Minnow
4.530
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
389.990
Hydration Free Energy
-6.890
Log(D) at pH=7.4
3.330
Log(P)
4.15
Log S
-4.37
Log(Vapor Pressure)
-5.8
Melting Point
123.08
pKa Acid
10.25
pKa Basic
6.0
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.9520
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.9520
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.9227
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.9227
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.9207
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.9207
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8825
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8825
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8808
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8808
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8750
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8750
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8584
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8584
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8466
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8466
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 3 0.8411
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 3 0.8411
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8356
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8356
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.8290
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.8290
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.8249
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.8249
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8236
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8236
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8235
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8235
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.8113
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.8113
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.8101
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.8101
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7995
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7995
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 3 0.7859
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 3 0.7859
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7818
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7818
Corticosteroid-binding globulin P31211 CBG_RAT Rattus norvegicus 3 0.7725
Corticosteroid-binding globulin P31211 CBG_RAT Rattus norvegicus 3 0.7725
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7712
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7712
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7632
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7632
Rhodopsin P02699 OPSD_BOVIN Bos taurus 3 0.7629
Rhodopsin P02699 OPSD_BOVIN Bos taurus 3 0.7629
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7627
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7627
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7624
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7624
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7595
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7595
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7594
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7594
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7520
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7520
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7513
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7513
Multidrug transporter MdfA P0AEY8 MDFA_ECOLI Escherichia coli 3 0.7433
Multidrug transporter MdfA P0AEY8 MDFA_ECOLI Escherichia coli 3 0.7433
Angiotensin-converting enzyme Q10714 ACE_DROME Drosophila melanogaster 3 0.7402
Angiotensin-converting enzyme Q10714 ACE_DROME Drosophila melanogaster 3 0.7402
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7385
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7385
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.7347
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.7347
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7277
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7277
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 3 0.7260
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 3 0.7260
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 3 0.7249
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 3 0.7249
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 2 0.7245
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 2 0.7245
Jasmonoyl--L-amino acid synthetase JAR1 Q9SKE2 JAR1_ARATH Arabidopsis thaliana 3 0.7239
Jasmonoyl--L-amino acid synthetase JAR1 Q9SKE2 JAR1_ARATH Arabidopsis thaliana 3 0.7239
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 2 0.7237
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 2 0.7237
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7205
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7205
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 2 0.7173
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 2 0.7173
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 3 0.7165
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 3 0.7165
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7164
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7164
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7152
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7152
TamL D3Y1I2 D3Y1I2_9ACTN Streptomyces sp. 307-9 2 0.7140
TamL D3Y1I2 D3Y1I2_9ACTN Streptomyces sp. 307-9 2 0.7140
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 2 0.7139
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 2 0.7139
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7132
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7132
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7122
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7122
Mineralocorticoid receptor P08235 MCR_HUMAN Homo sapiens 3 0.7110
Mineralocorticoid receptor P08235 MCR_HUMAN Homo sapiens 3 0.7110
Putative cytochrome P450 120 Q59990 CP120_SYNY3 Synechocystis sp 3 0.7109
Putative cytochrome P450 120 Q59990 CP120_SYNY3 Synechocystis sp 3 0.7109
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7088
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7088
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7002
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7002

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