(+)-sarcophine - Compound Card

(+)-sarcophine

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(+)-sarcophine

Structure
Zoomed Structure
  • Family: Animalia - Alcyoniidae
  • Kingdom: Animalia
  • Class: Terpenoid
    • Subclass: Cembranoid Diterpene
Canonical Smiles C/C/1=C\CC[C@@]2(C)O[C@@H]2CC/C(=C/[C@H]2C(=C(C)C(=O)O2)CC1)/C
InChI InChI=1S/C20H28O3/c1-13-6-5-11-20(4)18(23-20)10-8-14(2)12-17-16(9-7-13)15(3)19(21)22-17/h6,12,17-18H,5,7-11H2,1-4H3/b13-6+,14-12+/t17-,18+,20+/m0/s1
InChIKey CGAKBBMRMLAYMY-CFCZUDOTSA-N
Formula C20H28O3
HBA 3
HBD 0
MW 316.44
Rotatable Bonds 0
TPSA 38.83
LogP 4.63
Number Rings 3
Number Aromatic Rings 0
Heavy Atom Count 23
Formal Charge 0
Fraction CSP3 0.65
Exact Mass 316.2
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Sarcophyton trocheliophorum Alcyoniidae Animalia 205097
2 Sarcophyton ehrenbergi Alcyoniidae Animalia 358800

Showing of synonyms

  • Elkhateeb A, El-Beih AA, et al. (2014). New terpenes from the Egyptian soft coral Sarcophyton ehrenbergi. Marine Drugs,2014,12,1977-1986. [View] [PubMed]
  • Hegazy M-EF, Mohamed TA, et al. (2013). Trochelioid A and B, new cembranoid diterpenes from the Red Sea soft coral Sarcophyton trocheliophorum. Phytochemistry Letters,2013,6,383-386. [View]
Pubchem: 6436805
Nmrshiftdb2: 20027753
CPRiL: 131027
Structure

SMILES: C12C(O2)CCC=CCCC=3C(OC(=O)C3)C=CCC1

Level: 0

Mol. Weight: 316.44 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.98
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.39
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.15

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.36
Plasma Protein Binding
37.17
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
14.48
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.56
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.15
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
5.77
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
0.05
Rat (Acute)
1.75
Rat (Chronic Oral)
1.72
Fathead Minnow
4.76
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
383.94
Hydration Free Energy
-3.9
Log(D) at pH=7.4
4.03
Log(P)
4.26
Log S
-5.0
Log(Vapor Pressure)
-4.63
Melting Point
62.73
pKa Acid
7.6
pKa Basic
5.18
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.9520
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.9520
Rhodopsin P02699 OPSD_BOVIN Bos taurus 3 0.8700
Rhodopsin P02699 OPSD_BOVIN Bos taurus 3 0.8700
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8607
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.8607
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.8591
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.8591
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8559
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8559
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8204
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8204
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 3 0.7942
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 3 0.7942
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.7896
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.7896
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.7774
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.7774
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7730
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7730
Jasmonoyl--L-amino acid synthetase JAR1 Q9SKE2 JAR1_ARATH Arabidopsis thaliana 3 0.7663
Jasmonoyl--L-amino acid synthetase JAR1 Q9SKE2 JAR1_ARATH Arabidopsis thaliana 3 0.7663
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7660
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7660
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7644
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7644
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.7532
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.7532
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7502
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7502
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7475
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7475
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 2 0.7441
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 2 0.7441
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7383
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7383
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA P45523 FKBA_ECOLI Escherichia coli 4 0.7354
FKBP-type peptidyl-prolyl cis-trans isomerase FkpA P45523 FKBA_ECOLI Escherichia coli 4 0.7354
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 2 0.7326
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 2 0.7326
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7306
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7306
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7282
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7282
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.7265
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.7265
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7259
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7259
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7220
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7220
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7187
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7187
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7162
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 2 0.7162
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7150
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7150
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7146
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7146
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7139
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7139
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7132
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7132
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7110
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7110
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7091
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7091
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7083
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7083
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7047
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7047
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 3 0.7030
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 3 0.7030

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