Singardin - Compound Card

Singardin

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Singardin

Structure
Zoomed Structure
  • Family: Animalia - Alcyoniidae
  • Kingdom: Animalia
  • Class: Terpenoid
    • Subclass: Heptacyclic Norcembranoid Dimer
Canonical Smiles O=C1C[C@H](CC[C@]23O[C@H]3[C@@H](C[C@@]3(O[C@H](C1)C(=O)C3)C)OC(=O)[C@@]13[C@@H]([C@H](OC2=O)C[C@]2(C)O[C@H](C(=O)C2)CC(=O)C[C@H](CC3)C(=C)C)O1)C(C)C
InChI InChI=1S/C38H50O12/c1-19(2)21-7-9-37-31(49-37)29(17-35(5)15-25(41)27(47-35)13-23(39)11-21)46-34(44)38-10-8-22(20(3)4)12-24(40)14-28-26(42)16-36(6,48-28)18-30(32(38)50-38)45-33(37)43/h20-22,27-32H,1,7-18H2,2-6H3/t21-,22-,27-,28+,29+,30+,31+,32-,35+,36+,37+,38+/m0/s1
InChIKey PZBKBNQJTODIMD-VDQSPKFYSA-N
Formula C38H50O12
HBA 12
HBD 0
MW 698.81
Rotatable Bonds 2
TPSA 164.4
LogP 3.86
Number Rings 7
Number Aromatic Rings 0
Heavy Atom Count 50
Formal Charge 0
Fraction CSP3 0.79
Exact Mass 698.33
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Sinularia gardineri Alcyoniidae Animalia 668426

Showing of synonyms

  • Khalid A. El Sayed and Mark T. Hamann (1996). A new norcembranoid dimer from the Red Sea soft coral Sinularia gardineri. Journal of Natural Products,1996,59(7),687-689. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C1CCCC(=O)CC(O2)C(=O)CC2CC(C(C134)O4)OC(=O)C56C(O6)C(OC3=O)CC7CC(=O)C(O7)CC(=O)CCCC5

Level: 0

Mol. Weight: 698.81 g/mol

Cytotoxic

Absorption

Caco-2 (logPapp)
-4.99
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-3.02
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
297.67

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.67
Plasma Protein Binding
58.8
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.72
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-4.51
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.47
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
7.35
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-543166.84
Rat (Acute)
4.05
Rat (Chronic Oral)
2.4
Fathead Minnow
694.57
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
58048.35
Hydration Free Energy
-2.92
Log(D) at pH=7.4
2.19
Log(P)
2.89
Log S
-4.66
Log(Vapor Pressure)
-1865.02
Melting Point
197.65
pKa Acid
-1.84
pKa Basic
-1.42
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 4 0.7860
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 4 0.7860

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