Nobilisine - Compound Card

Nobilisine

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Nobilisine

Structure
Zoomed Structure
  • Family: Plantae - Amaryllidaceae
  • Kingdom: Plantae
  • Class: Alkaloid
Canonical Smiles CN1CC[C@@H]2[C@@H]1[C@H]1[C@@H]([C@H](C2)O)OC(=O)c2c1cc1OCOc1c2
InChI InChI=1S/C17H19NO5/c1-18-3-2-8-4-11(19)16-14(15(8)18)9-5-12-13(22-7-21-12)6-10(9)17(20)23-16/h5-6,8,11,14-16,19H,2-4,7H2,1H3/t8-,11-,14-,15+,16+/m0/s1
InChIKey ATGABXDKTMWXAQ-HQSYCBLWSA-N
Formula C17H19NO5
HBA 6
HBD 1
MW 317.34
Rotatable Bonds 0
TPSA 68.23
LogP 1.12
Number Rings 5
Number Aromatic Rings 1
Heavy Atom Count 23
Formal Charge 0
Fraction CSP3 0.59
Exact Mass 317.13
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Clivia nobilis Amaryllidaceae Plantae 112537

Showing of synonyms

  • Jeffs PW, Mueller L, et al. (1988). Nobilisine, a new alkaloid from Clivia nobilis. Journal of Natural Products,1988,51(3),549-554. [View]
Pubchem: 12303691
Nmrshiftdb2: 70096166

No compound-protein relationship available.

Structure

SMILES: O1COc(c12)cc3c(c2)C(=O)OC4C3C5C(CC4)CCN5

Level: 0

Mol. Weight: 317.34 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.72
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.67
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.31

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.45
Plasma Protein Binding
42.88
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
15.06
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.31
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-1.61
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.79
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-0.43
Rat (Acute)
2.68
Rat (Chronic Oral)
1.61
Fathead Minnow
3.92
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
390.99
Hydration Free Energy
-7.81
Log(D) at pH=7.4
1.75
Log(P)
1.18
Log S
-3.11
Log(Vapor Pressure)
-8.88
Melting Point
195.18
pKa Acid
7.25
pKa Basic
7.39
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.9034
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.9034
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 3 0.7735
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 3 0.7735
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7667
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7667
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.7574
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.7574
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7358
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7358
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7245
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7245
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7116
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7116
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7083
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7083
Gastrotropin P51161 FABP6_HUMAN Homo sapiens 3 0.7067
Gastrotropin P51161 FABP6_HUMAN Homo sapiens 3 0.7067
N-terminal acetyltransferase A complex subunit NAT1 P12945 NAT1_YEAST Saccharomyces cerevisiae 2 0.7025
N-terminal acetyltransferase A complex subunit NAT1 P12945 NAT1_YEAST Saccharomyces cerevisiae 2 0.7025
Cyclin-dependent kinase 9 P50750 CDK9_HUMAN Homo sapiens 3 0.7016
Cyclin-dependent kinase 9 P50750 CDK9_HUMAN Homo sapiens 3 0.7016
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7001
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7001

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