Voacangine - Compound Card

Voacangine

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Voacangine

Structure
Zoomed Structure
  • Family: Plantae - Apocynaceae
  • Kingdom: Plantae
  • Class: Alkaloid
    • Subclass: Indole Alkaloid
Canonical Smiles COC(=O)[C@@]12CC3CN([C@]2(C)[C@](C3)(C)CC)CCc2c1[nH]c1c2cc(cc1)OC
InChI InChI=1S/C24H32N2O3/c1-6-22(2)12-15-13-24(21(27)29-5)20-17(9-10-26(14-15)23(22,24)3)18-11-16(28-4)7-8-19(18)25-20/h7-8,11,15,25H,6,9-10,12-14H2,1-5H3/t15?,22-,23-,24-/m1/s1
InChIKey YGRJGDBMLTZRLL-NQLXVEKGSA-N
Formula C24H32N2O3
HBA 4
HBD 1
MW 396.53
Rotatable Bonds 3
TPSA 54.56
LogP 4.04
Number Rings 6
Number Aromatic Rings 2
Heavy Atom Count 29
Formal Charge 0
Fraction CSP3 0.62
Exact Mass 396.24
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Hedranthera barteri Apocynaceae Plantae 141540

Showing of synonyms

  • Agwada V, Patel MB, et al. (1970). Die Alkaloide aus Hedranthera barteri (Hook. f.) Pichonl. 139. Mitteilung uber die Alkaloide. Helvetica Chimica Acta,1970,53(7),1567-1577. [View]
CPRiL: 91702
Structure

SMILES: c1cccc2[nH]c(c3c12)C4C5N(CC3)CC(C4)CC5

Level: 0

Mol. Weight: 396.53 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.69
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-5.000
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-1.44

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.860
Plasma Protein Binding
65.95
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.130
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.550
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.930
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
7.010
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-26.620
Rat (Acute)
2.920
Rat (Chronic Oral)
1.910
Fathead Minnow
4.080
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
459.880
Hydration Free Energy
-4.740
Log(D) at pH=7.4
3.800
Log(P)
4.0
Log S
-4.03
Log(Vapor Pressure)
-8.22
Melting Point
209.77
pKa Acid
10.15
pKa Basic
7.69
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.9011
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.9011
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.8694
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.8694
Dipeptidyl peptidase 4 P14740 DPP4_RAT Rattus norvegicus 3 0.8530
Dipeptidyl peptidase 4 P14740 DPP4_RAT Rattus norvegicus 3 0.8530
Adenylate cyclase 2 A0A2U2H3Y1 A0A384LKY8_YERPE Yersinia pestis 3 0.8345
Adenylate cyclase 2 A0A2U2H3Y1 A0A384LKY8_YERPE Yersinia pestis 3 0.8345
2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase Q84HC8 NCSB1_STRCZ Streptomyces carzinostaticus 3 0.8070
2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase Q84HC8 NCSB1_STRCZ Streptomyces carzinostaticus 3 0.8070
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8035
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8035
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7910
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7910
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7894
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7894
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7792
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7792
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.7771
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.7771
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7699
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7699
Cyclin-dependent kinase 9 P50750 CDK9_HUMAN Homo sapiens 3 0.7579
Cyclin-dependent kinase 9 P50750 CDK9_HUMAN Homo sapiens 3 0.7579
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.7572
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.7572
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 3 0.7560
Glutamate receptor 2 P19491 GRIA2_RAT Rattus norvegicus 3 0.7560
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7534
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.7534
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7510
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7510
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7453
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7453
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7433
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7433
2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase Q84HC8 NCSB1_STRCZ Streptomyces carzinostaticus 3 0.7432
2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase Q84HC8 NCSB1_STRCZ Streptomyces carzinostaticus 3 0.7432
Formylmethanofuran--tetrahydromethanopterin formyltransferase Q49610 FTR_METKA Methanopyrus kandleri 3 0.7384
Formylmethanofuran--tetrahydromethanopterin formyltransferase Q49610 FTR_METKA Methanopyrus kandleri 3 0.7384
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7377
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7377
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7375
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7375
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7339
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7339
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7296
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 2 0.7296
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7296
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 2 0.7296
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 2 0.7292
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7292
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7292
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 2 0.7292
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.7269
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.7269
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7251
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 2 0.7251
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7244
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7244
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.7239
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.7239
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7234
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7234
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 2 0.7214
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 2 0.7214
Carminomycin 4-O-methyltransferase DnrK Q06528 DNRK_STRPE Streptomyces peucetius 3 0.7194
Carminomycin 4-O-methyltransferase DnrK Q06528 DNRK_STRPE Streptomyces peucetius 3 0.7194
Chloramphenicol 3-O phosphotransferase Q56148 CPT_STRVP Streptomyces venezuelae 3 0.7172
Chloramphenicol 3-O phosphotransferase Q56148 CPT_STRVP Streptomyces venezuelae 3 0.7172
Type II methyltransferase M.TaqI P14385 MTTA_THEAQ Thermus aquaticus 3 0.7158
Type II methyltransferase M.TaqI P14385 MTTA_THEAQ Thermus aquaticus 3 0.7158
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 2 0.7121
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 2 0.7121
L-lactate dehydrogenase A chain P13491 LDHA_RABIT Oryctolagus cuniculus 2 0.7120
L-lactate dehydrogenase A chain P13491 LDHA_RABIT Oryctolagus cuniculus 2 0.7120
F420-dependent methylenetetrahydromethanopterin dehydrogenase P94951 MTD_METKA Methanopyrus kandleri 2 0.7107
F420-dependent methylenetetrahydromethanopterin dehydrogenase P94951 MTD_METKA Methanopyrus kandleri 2 0.7107
Geranyl diphosphate 2-C-methyltransferase D3KYU3 GPPMT_STRLS Streptomyces lasalocidi 3 0.7076
Geranyl diphosphate 2-C-methyltransferase D3KYU3 GPPMT_STRLS Streptomyces lasalocidi 3 0.7076
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 2 0.7075
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 2 0.7075
Aurora kinase A O14965 AURKA_HUMAN Homo sapiens 3 0.7069
Aurora kinase A O14965 AURKA_HUMAN Homo sapiens 3 0.7069
Type II methyltransferase M.HhaI P05102 MTH1_HAEPH Haemophilus parahaemolyticus 3 0.7056
Type II methyltransferase M.HhaI P05102 MTH1_HAEPH Haemophilus parahaemolyticus 3 0.7056
(R)-S-adenosyl-L-methionine hydrolase O58212 O58212_PYRHO Pyrococcus horikoshii OT3 3 0.7041
(R)-S-adenosyl-L-methionine hydrolase O58212 O58212_PYRHO Pyrococcus horikoshii OT3 3 0.7041
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7035
Ribonuclease TTHA0252 Q5SLP1 RNSE_THET8 Thermus thermophilus 3 0.7035
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 2 0.7035
Ribonuclease TTHA0252 Q5SLP1 RNSE_THET8 Thermus thermophilus 3 0.7035
Focal adhesion kinase 1 Q05397 FAK1_HUMAN Homo sapiens 2 0.7029
Focal adhesion kinase 1 Q05397 FAK1_HUMAN Homo sapiens 2 0.7029
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7020
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7020

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