Isorhamnetin-3-O-beta-D-glucopyranoside-(2''→1''')-rhamnopyranoside - Compound Card

Isorhamnetin-3-O-beta-D-glucopyranoside-(2''→1''')-rhamnopyranoside

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Isorhamnetin-3-O-beta-D-glucopyranoside-(2''→1''')-rhamnopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Avicenniaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonoid Glycoside
Canonical Smiles OCC1O[C@@H](Oc2c(oc3c(c2=O)c(O)cc(c3)O)c2ccc(c(c2)OC)O)[C@H](C([C@@H]1O)O)OC1O[C@H](C)[C@H]([C@@H]([C@@H]1O)O)O
InChI InChI=1S/C28H32O16/c1-9-18(33)21(36)23(38)27(40-9)44-26-22(37)19(34)16(8-29)42-28(26)43-25-20(35)17-13(32)6-11(30)7-15(17)41-24(25)10-3-4-12(31)14(5-10)39-2/h3-7,9,16,18-19,21-23,26-34,36-38H,8H2,1-2H3/t9-,16?,18-,19-,21+,22?,23+,26+,27?,28+/m1/s1
InChIKey QHLKSZBFIJJREC-YCJRXWMNSA-N
Formula C28H32O16
HBA 16
HBD 9
MW 624.55
Rotatable Bonds 7
TPSA 258.43
LogP -1.38
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 44
Formal Charge 0
Fraction CSP3 0.46
Exact Mass 624.17
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Carissa edulis Apocynaceae Plantae 992661
2 Avicennia marina Avicenniaceae Plantae 82927

Showing of synonyms

  • Al-Youssef HM and Hassan WHB. (2014). Chemical constituents of Carissa edulis Vahl. Arabian Journal of Chemistry,2014,in press. [View]
  • Sharaf M, El-Ansari MA and Saleh NAM. (2000). New flavonoids from Avicennia marina. Fitoterapia,2000,71(3),274-277. [View] [PubMed]
Pubchem: 163018620

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC(OCCC4)C4OC5CCCCO5

Level: 3

Mol. Weight: 624.55 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC(OCCC3)C3OC4CCCCO4

Level: 2

Mol. Weight: 624.55 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 624.55 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 624.55 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 624.55 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 624.55 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 624.55 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 624.55 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 624.55 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.64
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.19
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
14.27

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.81
Plasma Protein Binding
49.24
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
13.04
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-2.58
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.86
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.17
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-23002.71
Rat (Acute)
2.29
Rat (Chronic Oral)
4.53
Fathead Minnow
46.13
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
365.94
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-0.12
Log(P)
-0.38
Log S
-4.81
Log(Vapor Pressure)
-16.69
Melting Point
196.02
pKa Acid
4.22
pKa Basic
4.92
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8905
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8905
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.8704
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.8704
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8626
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.8626
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8618
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8618
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 4 0.8361
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 4 0.8361
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.8279
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.8279
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8006
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8006
Maltose/maltodextrin-binding periplasmic protein P0AEX9 MALE_ECOLI Escherichia coli 3 0.7858
Maltose/maltodextrin-binding periplasmic protein P0AEX9 MALE_ECOLI Escherichia coli 3 0.7858
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7754
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7754
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7718
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7718
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7663
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7663
S-adenosylmethionine decarboxylase proenzyme P17707 DCAM_HUMAN Homo sapiens 3 0.7635
S-adenosylmethionine decarboxylase proenzyme P17707 DCAM_HUMAN Homo sapiens 3 0.7635
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7580
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7580
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7563
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7563
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7482
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7482
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7442
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7442
Neopullulanase 2 Q08751 NEPU2_THEVU Thermoactinomyces vulgaris 3 0.7380
Neopullulanase 2 Q08751 NEPU2_THEVU Thermoactinomyces vulgaris 3 0.7380
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7269
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7269
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7202
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7202
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7131
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7131
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7105
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7105
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7087
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7087
Disintegrin and metalloproteinase domain-containing protein 17 P78536 ADA17_HUMAN Homo sapiens 5 0.7067
Disintegrin and metalloproteinase domain-containing protein 17 P78536 ADA17_HUMAN Homo sapiens 5 0.7067
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7061
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7061
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7020
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7020
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7004
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7004

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