Stavaroside F - Compound Card

Stavaroside F

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Stavaroside F

Structure
Zoomed Structure
  • Family: Plantae - Apocynaceae
  • Kingdom: Plantae
  • Class: Steroid
    • Subclass: Pregnane Glycoside
Canonical Smiles COC1CC(C)(O[C@H]2CC[C@]3(C(=CC[C@@]4(C3[C@H](OC(=O)C)[C@@H](OC(=O)C)[C@]3([C@]4(O)CC[C@H]3C(=O)C)C)O)C2)C)OC(C1OC1CC(OC)C(C(O1)C)OC1OC(C)C(C(C1O)OC)O)C
InChI InChI=1S/C47H74O18/c1-22(48)30-15-18-47(54)45(30,9)41(61-27(6)50)39(60-26(5)49)40-43(7)16-14-29(19-28(43)13-17-46(40,47)53)65-44(8)21-32(56-11)37(25(4)64-44)62-33-20-31(55-10)36(24(3)58-33)63-42-35(52)38(57-12)34(51)23(2)59-42/h13,23-25,29-42,51-54H,14-21H2,1-12H3/t23?,24?,25?,29-,30-,31?,32?,33?,34?,35?,36?,37?,38?,39-,40?,41+,42?,43-,44?,45-,46-,47+/m0/s1
InChIKey RWGXYCYZBYORPO-QHSPPURNSA-N
Formula C47H74O18
HBA 18
HBD 4
MW 927.09
Rotatable Bonds 12
TPSA 233.66
LogP 2.79
Number Rings 7
Number Aromatic Rings 0
Heavy Atom Count 65
Formal Charge 0
Fraction CSP3 0.89
Exact Mass 926.49
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Stapelia variegata Apocynaceae Plantae 141497

Showing of synonyms

  • Sayed KA, Halim AF, et al. (1995). Pregnane glycosides from Stapelia variegata. Phytochemistry,1995,39(2),395-403. [View] [PubMed]
Pubchem: 162970576
Nmrshiftdb2: 60053155

No compound-protein relationship available.

Structure

SMILES: C1CCC(C12)CCC3C2CC=C4C3CCC(C4)OC(OC5)CCC5OC(OC6)CCC6OC7CCCCO7

Level: 3

Mol. Weight: 927.09 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CC=C4C3CCC(C4)OC(OC5)CCC5OC6CCCCO6

Level: 2

Mol. Weight: 927.09 g/mol

Structure

SMILES: O1CCCCC1OC2CCC(OC2)OC3CCCOC3

Level: 2

Mol. Weight: 927.09 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CC=C4C3CCC(C4)OC5CCCCO5

Level: 1

Mol. Weight: 927.09 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 927.09 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CC=C4C3CCCC4

Level: 0

Mol. Weight: 927.09 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 927.09 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.62
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
1469.860
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
192828.18

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.530
Plasma Protein Binding
73.08
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
4.560
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Toxic
Bioconcentration Factor
-4486.400
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.420
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
4.400
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-349976668.040
Rat (Acute)
5.150
Rat (Chronic Oral)
3.570
Fathead Minnow
441778.040
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
39359436.340
Hydration Free Energy
-2.920
Log(D) at pH=7.4
-6.130
Log(P)
2.79
Log S
-4.07
Log(Vapor Pressure)
-1295985.57
Melting Point
196.92
pKa Acid
-9365.47
pKa Basic
-51.29
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.8632
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.8632
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.7592
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.7592

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