Stemmoside A - Compound Card

Stemmoside A

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Stemmoside A

Structure
Zoomed Structure
  • Family: Plantae - Apocynaceae
  • Kingdom: Plantae
  • Class: Steroid
    • Subclass: Pregnane Ester Glycoside
Canonical Smiles OCC1O[C@@](O)(O[C@H]2C[C@@H]([C@@]3([C@@]2(O)C2CCC4=CC(=O)CC[C@@]4(C2CC3)C)C)C(=O)C)[C@H](C([C@@H]1O)O)O
InChI InChI=1S/C27H40O10/c1-13(29)18-11-20(37-27(35)23(33)22(32)21(31)19(12-28)36-27)26(34)17-5-4-14-10-15(30)6-8-24(14,2)16(17)7-9-25(18,26)3/h10,16-23,28,31-35H,4-9,11-12H2,1-3H3/t16?,17?,18-,19?,20+,21-,22?,23+,24+,25-,26-,27-/m1/s1
InChIKey NKFSYIXIONAVQO-XZXNEYSLSA-N
Formula C27H40O10
HBA 10
HBD 6
MW 524.61
Rotatable Bonds 4
TPSA 173.98
LogP -0.05
Number Rings 5
Number Aromatic Rings 0
Heavy Atom Count 37
Formal Charge 0
Fraction CSP3 0.85
Exact Mass 524.26
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Solenostemma argel Apocynaceae Plantae 219273

Showing of synonyms

  • Hamed AI. (2001). New steroids from Solenostemma argel leaves. Fitoterapia,2001,72(7),747-755. [View] [PubMed]
Pubchem: 162817527
Nmrshiftdb2: 70106897

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OC2CCC(C23)CCC4C3CCC=5C4CCC(=O)C5

Level: 1

Mol. Weight: 524.61 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC=4C3CCC(=O)C4

Level: 0

Mol. Weight: 524.61 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 524.61 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.31
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-5.33
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
0.81

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.74
Plasma Protein Binding
77.6
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
0.33
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-4.84
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.54
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.31
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-702.93
Rat (Acute)
3.39
Rat (Chronic Oral)
3.39
Fathead Minnow
3.47
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
497.2
Hydration Free Energy
-3.0
Log(D) at pH=7.4
0.78
Log(P)
-0.62
Log S
-2.11
Log(Vapor Pressure)
-13.93
Melting Point
200.42
pKa Acid
3.71
pKa Basic
7.2
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8969
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8969
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8406
Macrophage metalloelastase P39900 MMP12_HUMAN Homo sapiens 3 0.8406
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 3 0.7918
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 3 0.7918
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.7647
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.7647
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7519
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7519
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 3 0.7498
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 3 0.7498

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