(-)-lyoniresinol 3alpha-O-beta-D-glucopyranoside - Compound Card

(-)-lyoniresinol 3alpha-O-beta-D-glucopyranoside

Select a section from the left sidebar

(-)-lyoniresinol 3alpha-O-beta-D-glucopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Bignoniaceae
  • Kingdom: Plantae
  • Class: Phenolic
    • Subclass: Phenolic Glycoside
Canonical Smiles OC[C@H]1Cc2cc(OC)c(c(c2[C@H]([C@@H]1CO[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)c1cc(OC)c(c(c1)OC)O)OC)O
InChI InChI=1S/C28H38O13/c1-36-16-7-13(8-17(37-2)22(16)31)20-15(11-40-28-26(35)25(34)23(32)19(10-30)41-28)14(9-29)5-12-6-18(38-3)24(33)27(39-4)21(12)20/h6-8,14-15,19-20,23,25-26,28-35H,5,9-11H2,1-4H3/t14-,15-,19-,20+,23-,25+,26-,28-/m1/s1
InChIKey PQQRNPDHSJDAGV-UGJKOEBBSA-N
Formula C28H38O13
HBA 13
HBD 7
MW 582.6
Rotatable Bonds 10
TPSA 196.99
LogP -0.14
Number Rings 4
Number Aromatic Rings 2
Heavy Atom Count 41
Formal Charge 0
Fraction CSP3 0.57
Exact Mass 582.23
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Amphilophium paniculatum Bignoniaceae Plantae 353927

Showing of synonyms

  • Samy MN, Khalil HE, et al. (2015). Amphipaniculosides A-D, triterpenoid glycosides, and amphipaniculoside E, an aliphatic alcohol glycoside from the leaves of Amphilophium paniculatum. Phytochemistry,2015,115,261-268. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OCC(C2c3ccccc3)CCc(c24)cccc4

Level: 2

Mol. Weight: 582.6 g/mol

Structure

SMILES: O1CCCCC1OCC(C2)CCc(c23)cccc3

Level: 1

Mol. Weight: 582.6 g/mol

Structure

SMILES: c1cccc(c12)CCCC2c3ccccc3

Level: 1

Mol. Weight: 582.6 g/mol

Structure

SMILES: C1CCCc(c12)cccc2

Level: 0

Mol. Weight: 582.6 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 582.6 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 582.6 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.56
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.320
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
2.63

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.800
Plasma Protein Binding
70.07
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
11.770
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-2.100
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.600
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
5.340
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-5754.590
Rat (Acute)
2.460
Rat (Chronic Oral)
4.200
Fathead Minnow
14.770
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
482.160
Hydration Free Energy
-2.940
Log(D) at pH=7.4
0.210
Log(P)
-1.07
Log S
-4.06
Log(Vapor Pressure)
-10.38
Melting Point
181.75
pKa Acid
5.9
pKa Basic
4.1
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9215
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9215
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9083
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9083
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.9044
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.9044
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9005
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.9005
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8947
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.8947
Bromodomain testis-specific protein Q58F21 BRDT_HUMAN Homo sapiens 3 0.8918
Bromodomain testis-specific protein Q58F21 BRDT_HUMAN Homo sapiens 3 0.8918
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8802
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8802
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.8687
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.8687
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 4 0.8611
Riboflavin synthase P0AFU8 RISA_ECOLI Escherichia coli 4 0.8611
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 5 0.8606
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 5 0.8606
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8525
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8525
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8505
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8505
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8467
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8467
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8263
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8263
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8072
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8072
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7974
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7974
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.7973
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.7973
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 3 0.7769
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 3 0.7769
Maltose/maltodextrin-binding periplasmic protein P0AEX9 MALE_ECOLI Escherichia coli 3 0.7765
Maltose/maltodextrin-binding periplasmic protein P0AEX9 MALE_ECOLI Escherichia coli 3 0.7765
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.7702
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.7702
NADH:flavin oxidoreductase Sye1 Q8EEC8 Q8EEC8_SHEON Shewanella oneidensis 3 0.7613
NADH:flavin oxidoreductase Sye1 Q8EEC8 Q8EEC8_SHEON Shewanella oneidensis 3 0.7613
RNA-dependent RNA polymerase Q6A562 Q6A562_9VIRU Thosea asigna virus 3 0.7534
RNA-dependent RNA polymerase Q6A562 Q6A562_9VIRU Thosea asigna virus 3 0.7534
Lactoperoxidase A0A452E9Y6 PERL_CAPHI Capra hircus 3 0.7503
Lactoperoxidase A0A452E9Y6 PERL_CAPHI Capra hircus 3 0.7503
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7457
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7457
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7422
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7422
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7377
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7377
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7377
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7377
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.7311
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.7311
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 5 0.7306
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 5 0.7306
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7280
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7280
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7240
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7240
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7216
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7216
Proliferating cell nuclear antigen P12004 PCNA_HUMAN Homo sapiens 3 0.7214
Proliferating cell nuclear antigen P12004 PCNA_HUMAN Homo sapiens 3 0.7214
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7210
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7210
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7183
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7183
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 4 0.7160
Carbonyl reductase [NADPH] 1 P16152 CBR1_HUMAN Homo sapiens 3 0.7160
Carbonyl reductase [NADPH] 1 P16152 CBR1_HUMAN Homo sapiens 3 0.7160
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 4 0.7160
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 4 0.7133
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 4 0.7133
Glutathione S-transferase P P09211 GSTP1_HUMAN Homo sapiens 2 0.7095
Glutathione S-transferase P P09211 GSTP1_HUMAN Homo sapiens 2 0.7095
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 4 0.7049
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 4 0.7049
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7047
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7047

Download SDF