Methyl neochebulanin - Compound Card

Methyl neochebulanin

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Methyl neochebulanin

Structure
Zoomed Structure
  • Family: Plantae - Combretaceae
  • Kingdom: Plantae
  • Class: Phenolic
    • Subclass: Chebulic Ellagitannin
Canonical Smiles OC[C@H]1O[C@@H](OC(=O)c2cc(O)c(c(c2)O)O)[C@@H]([C@H](C1OC(=O)[C@H]([C@@H]1[C@H](OC(=O)c2c1c(O)c(c(c2)O)O)C(=O)OC)CC(=O)O)O)O
InChI InChI=1S/C28H28O20/c1-44-27(43)23-16(15-8(25(41)47-23)4-12(32)18(36)19(15)37)9(5-14(33)34)26(42)46-22-13(6-29)45-28(21(39)20(22)38)48-24(40)7-2-10(30)17(35)11(31)3-7/h2-4,9,13,16,20-23,28-32,35-39H,5-6H2,1H3,(H,33,34)/t9-,13+,16-,20+,21+,22?,23-,28-/m0/s1
InChIKey RDHOOOLYXCLSDL-NSVKKBJESA-N
Formula C28H28O20
HBA 19
HBD 10
MW 684.51
Rotatable Bonds 9
TPSA 333.8
LogP -1.99
Number Rings 4
Number Aromatic Rings 2
Heavy Atom Count 48
Formal Charge 0
Fraction CSP3 0.39
Exact Mass 684.12
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Terminalia species Combretaceae Plantae 39992

Showing of synonyms

  • Pfundstein B, El Desouky SK, et al. (2010). Polyphenolic compounds in the fruits of Egyptian medicinal plants (Terminalia bellerica, Terminalia chebula and Terminalia horrida): Characterization, quantitation and determination of antioxidant capacities. Phytochemistry,2010,71(10),1132-1148. [View] [PubMed]
Pubchem: 162941932
Nmrshiftdb2: 80004707

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)C(COC2=O)CC(=O)OC3CCC(OC3)OC(=O)c4ccccc4

Level: 2

Mol. Weight: 684.51 g/mol

Structure

SMILES: C1OCCCC1OC(=O)CC(COC2=O)c(c23)cccc3

Level: 1

Mol. Weight: 684.51 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2CCCCO2

Level: 1

Mol. Weight: 684.51 g/mol

Structure

SMILES: c1cccc(c12)CCOC2=O

Level: 0

Mol. Weight: 684.51 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 684.51 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 684.51 g/mol

Antioxidant

Absorption

Caco-2 (logPapp)
-6.36
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.69
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
44.35

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.77
Plasma Protein Binding
51.93
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
6.88
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-3.77
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.63
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
7.38
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-86707.01
Rat (Acute)
2.24
Rat (Chronic Oral)
3.52
Fathead Minnow
128.67
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
1371.65
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-2.27
Log(P)
-1.53
Log S
-3.36
Log(Vapor Pressure)
-136.85
Melting Point
196.66
pKa Acid
4.53
pKa Basic
3.88
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.8621
NAD-capped RNA hydrolase NudC P32664 NUDC_ECOLI Escherichia coli 3 0.8621
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8292
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8292
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8207
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8207
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8167
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8167
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 3 0.8136
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 3 0.8136
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.8012
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.8012
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7997
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7997
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7987
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7987
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 4 0.7938
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 4 0.7938
Glucose-1-phosphate thymidylyltransferase 1 P37744 RMLA1_ECOLI Escherichia coli 5 0.7801
Glucose-1-phosphate thymidylyltransferase 1 P37744 RMLA1_ECOLI Escherichia coli 5 0.7801
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7709
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7709
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7704
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7704
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7575
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7575
Hypoxanthine-guanine phosphoribosyltransferase P00492 HPRT_HUMAN Homo sapiens 4 0.7469
Hypoxanthine-guanine phosphoribosyltransferase P00492 HPRT_HUMAN Homo sapiens 4 0.7469
UDP-galactopyranose mutase Q48485 GLF1_KLEPN Klebsiella pneumoniae 3 0.7423
UDP-galactopyranose mutase Q48485 GLF1_KLEPN Klebsiella pneumoniae 3 0.7423
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7359
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7359
Flavin-dependent thymidylate synthase Q9WYT0 THYX_THEMA Thermotoga maritima 3 0.7265
Flavin-dependent thymidylate synthase Q9WYT0 THYX_THEMA Thermotoga maritima 3 0.7265
Hygromycin-B 4-O-kinase P00557 KHYB_ECOLX Escherichia coli 3 0.7213
Hygromycin-B 4-O-kinase P00557 KHYB_ECOLX Escherichia coli 3 0.7213
Tannase B3Y018 B3Y018_LACPN Lactiplantibacillus plantarum 4 0.7149
Tannase B3Y018 B3Y018_LACPN Lactiplantibacillus plantarum 4 0.7149
D-alanyl-D-alanine carboxypeptidase P15555 DAC_STRSR Streptomyces sp 3 0.7136
D-alanyl-D-alanine carboxypeptidase P15555 DAC_STRSR Streptomyces sp 3 0.7136
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7130
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7130
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.7057
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.7057
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7031
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7031
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7004
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.7004

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