Chebulinic acid - Compound Card

Chebulinic acid

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Chebulinic acid

Structure
Zoomed Structure
  • Family: Plantae - Combretaceae
  • Kingdom: Plantae
  • Class: Phenolic
    • Subclass: Chebulic Ellagitannin
Canonical Smiles OC(=O)C[C@@H]1C(=O)O[C@@H]2[C@@H](COC(=O)c3cc(O)c(c(c3)O)O)O[C@H]([C@@H]([C@H]2OC(=O)c2cc(O)c(c(c2)O)O)OC(=O)c2c3[C@H]1[C@H](O)C(=O)Oc3c(c(c2)O)O)OC(=O)c1cc(O)c(c(c1)O)O
InChI InChI=1S/C41H32O27/c42-15-1-10(2-16(43)26(15)51)35(56)62-9-22-31-33(66-36(57)11-3-17(44)27(52)18(45)4-11)34(41(63-22)68-37(58)12-5-19(46)28(53)20(47)6-12)67-38(59)13-7-21(48)29(54)32-25(13)24(30(55)40(61)65-32)14(8-23(49)50)39(60)64-31/h1-7,14,22,24,30-31,33-34,41-48,51-55H,8-9H2,(H,49,50)/t14-,22+,24-,30-,31+,33-,34+,41-/m0/s1
InChIKey YGVHOSGNOYKRIH-FJPMMHPYSA-N
Formula C41H32O27
HBA 26
HBD 13
MW 956.68
Rotatable Bonds 9
TPSA 447.09
LogP 0.02
Number Rings 7
Number Aromatic Rings 4
Heavy Atom Count 68
Formal Charge 0
Fraction CSP3 0.24
Exact Mass 956.11
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Terminalia species Combretaceae Plantae 39992

Showing of synonyms

  • Pfundstein B, El Desouky SK, et al. (2010). Polyphenolic compounds in the fruits of Egyptian medicinal plants (Terminalia bellerica, Terminalia chebula and Terminalia horrida): Characterization, quantitation and determination of antioxidant capacities. Phytochemistry,2010,71(10),1132-1148. [View] [PubMed]
Pubchem: 72284
Kegg Ligand: C10215
Chebi: 3584
CPRiL: 77312
Structure

SMILES: c1ccccc1C(=O)OC2C(OC3=O)C(OC(=O)c4ccccc4)OC(COC(=O)c5ccccc5)C2OC(=O)CC6CC(=O)Oc7cccc3c67

Level: 3

Mol. Weight: 956.68 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2C(OC3=O)COC(COC(=O)c4ccccc4)C2OC(=O)CC5CC(=O)Oc6cccc3c56

Level: 2

Mol. Weight: 956.68 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(C(C2)OC3=O)OC(COC(=O)c4ccccc4)C2OC(=O)CC5CC(=O)Oc6cccc3c56

Level: 2

Mol. Weight: 956.68 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(OC2)C(OC3=O)C(OC(=O)c4ccccc4)C2OC(=O)CC5CC(=O)Oc6cccc3c56

Level: 2

Mol. Weight: 956.68 g/mol

Structure

SMILES: c1ccccc1C(=O)OCC(OCC(C2)OC3=O)C2OC(=O)CC4CC(=O)Oc5cccc3c45

Level: 1

Mol. Weight: 956.68 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(OC2)C(OC3=O)CC2OC(=O)CC4CC(=O)Oc5cccc3c45

Level: 1

Mol. Weight: 956.68 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(C(OC2=O)COC3)C3OC(=O)CC4CC(=O)Oc5cccc2c45

Level: 1

Mol. Weight: 956.68 g/mol

Structure

SMILES: c12c3cccc1OC(=O)CC2CC(=O)OC4CC(OC3=O)COC4

Level: 0

Mol. Weight: 956.68 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 956.68 g/mol

Antioxidant

Absorption

Caco-2 (logPapp)
-6.52
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
6859.61
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
897338.5

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.43
Plasma Protein Binding
21.67
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
10.53
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-20863.13
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
1.16
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1628625209.81
Rat (Acute)
2.5
Rat (Chronic Oral)
6.98
Fathead Minnow
2055802.73
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
183163725.3
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-92.46
Log(P)
-0.25
Log S
-5.84
Log(Vapor Pressure)
-6031504.74
Melting Point
362.76
pKa Acid
-43902.82
pKa Basic
-324.69
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.9069
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.9069
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 3 0.8992
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 3 0.8992
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 3 0.8891
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 3 0.8891
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.8645
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.8645
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8598
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8598
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8513
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8513
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8469
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8469
Formate--tetrahydrofolate ligase P21164 FTHS_MOOTH Moorella thermoacetica 3 0.8468
Formate--tetrahydrofolate ligase P21164 FTHS_MOOTH Moorella thermoacetica 3 0.8468
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8407
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8407
Hypoxanthine-guanine phosphoribosyltransferase P00492 HPRT_HUMAN Homo sapiens 4 0.8364
Hypoxanthine-guanine phosphoribosyltransferase P00492 HPRT_HUMAN Homo sapiens 4 0.8364
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8242
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8242
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8169
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8169
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8135
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8135
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.8086
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.8086
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.8037
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.8037
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.8016
Phenylalanine-4-hydroxylase P00439 PH4H_HUMAN Homo sapiens 3 0.8016
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.8015
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.8015
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7966
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7966
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7965
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7965
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7952
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7952
Alpha amylase B8CZ54 B8CZ54_HALOH Halothermothrix orenii 3 0.7939
Alpha amylase B8CZ54 B8CZ54_HALOH Halothermothrix orenii 3 0.7939
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Q81LL4 MTNN_BACAN Bacillus anthracis 3 0.7868
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase Q81LL4 MTNN_BACAN Bacillus anthracis 3 0.7868
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.7732
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.7732
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7699
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7699
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7692
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7692
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 3 0.7483
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 3 0.7483
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7460
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7460
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7459
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7459
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta P78356 PI42B_HUMAN Homo sapiens 4 0.7447
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta P78356 PI42B_HUMAN Homo sapiens 4 0.7447
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.7410
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.7410
Flavin-dependent thymidylate synthase Q9WYT0 THYX_THEMA Thermotoga maritima 3 0.7380
Flavin-dependent thymidylate synthase Q9WYT0 THYX_THEMA Thermotoga maritima 3 0.7380
Single-strand selective monofunctional uracil DNA glycosylase Q9YGN6 SMUG1_XENLA Xenopus laevis 4 0.7374
Single-strand selective monofunctional uracil DNA glycosylase Q9YGN6 SMUG1_XENLA Xenopus laevis 4 0.7374
Neopullulanase 2 Q08751 NEPU2_THEVU Thermoactinomyces vulgaris 3 0.7360
Neopullulanase 2 Q08751 NEPU2_THEVU Thermoactinomyces vulgaris 3 0.7360
3-hydroxy-3-methylglutaryl-coenzyme A reductase P04035 HMDH_HUMAN Homo sapiens 4 0.7360
3-hydroxy-3-methylglutaryl-coenzyme A reductase P04035 HMDH_HUMAN Homo sapiens 4 0.7360
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7349
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7349
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7340
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7340
14-3-3 protein gamma P61981 1433G_HUMAN Homo sapiens 3 0.7324
14-3-3 protein gamma P61981 1433G_HUMAN Homo sapiens 3 0.7324
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 4 0.7278
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 4 0.7278
Aspartate carbamoyltransferase catalytic subunit P0A786 PYRB_ECOLI Escherichia coli 3 0.7261
Aspartate carbamoyltransferase catalytic subunit P0A786 PYRB_ECOLI Escherichia coli 3 0.7261
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7249
Purine nucleoside phosphorylase P55859 PNPH_BOVIN Bos taurus 4 0.7249
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 4 0.7221
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 4 0.7221
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7213
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7213
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7187
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7187
Tannase B3Y018 B3Y018_LACPN Lactiplantibacillus plantarum 4 0.7180
Tannase B3Y018 B3Y018_LACPN Lactiplantibacillus plantarum 4 0.7180
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7180
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7180
3-hydroxy-3-methylglutaryl-coenzyme A reductase P04035 HMDH_HUMAN Homo sapiens 3 0.7178
3-hydroxy-3-methylglutaryl-coenzyme A reductase P04035 HMDH_HUMAN Homo sapiens 3 0.7178
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 5 0.7144
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 5 0.7144
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7138
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7138
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7122
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7122
Nuclear receptor subfamily 5 group A member 2 O00482 NR5A2_HUMAN Homo sapiens 3 0.7107
Nuclear receptor subfamily 5 group A member 2 O00482 NR5A2_HUMAN Homo sapiens 3 0.7107
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7101
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7101
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7092
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7092
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7085
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7085
Uridine phosphorylase Q9KT71 Q9KT71_VIBCH Vibrio cholerae serotype O1 4 0.7065
Uridine phosphorylase Q9KT71 Q9KT71_VIBCH Vibrio cholerae serotype O1 4 0.7065
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7058
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.7058
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 3 0.7058
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.7058
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 3 0.7058
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7058
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 2 0.7049
Ephrin type-B receptor 2 P54763 EPHB2_MOUSE Mus musculus 2 0.7049
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7045
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7045
Acyl-CoA dehydrogenase, short-chain specific Q06319 ACDS_MEGEL Megasphaera elsdenii 4 0.7025
Acyl-CoA dehydrogenase, short-chain specific Q06319 ACDS_MEGEL Megasphaera elsdenii 4 0.7025

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