1beta-hydroxy-kryptogenin-1-O-alpha-L-rhamnopyranosyl-(1→2)-alpha-L-arabinopyranoside - Compound Card

1beta-hydroxy-kryptogenin-1-O-alpha-L-rhamnopyranosyl-(1→2)-alpha-L-arabinopyranoside

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1beta-hydroxy-kryptogenin-1-O-alpha-L-rhamnopyranosyl-(1→2)-alpha-L-arabinopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Dracaenaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Steroidal Saponin
Canonical Smiles OC[C@@H](CCC(=O)[C@H](C1C(=O)CC2C1(C)CCC1C2CC=C2C1(C)[C@@H](C[C@@H](C2)O)OC1OCC(C(C1OC1OC(C)C(C(C1O)O)O)O)O)C)C
InChI InChI=1S/C38H60O13/c1-17(15-39)6-9-25(41)18(2)29-26(42)14-24-22-8-7-20-12-21(40)13-28(38(20,5)23(22)10-11-37(24,29)4)50-36-34(31(45)27(43)16-48-36)51-35-33(47)32(46)30(44)19(3)49-35/h7,17-19,21-24,27-36,39-40,43-47H,6,8-16H2,1-5H3/t17-,18-,19?,21-,22?,23?,24?,27?,28-,29?,30?,31?,32?,33?,34?,35?,36?,37?,38?/m1/s1
InChIKey ABXNIXPADXELSI-XHGOXSGISA-N
Formula C38H60O13
HBA 13
HBD 7
MW 724.89
Rotatable Bonds 10
TPSA 212.67
LogP 1.01
Number Rings 6
Number Aromatic Rings 0
Heavy Atom Count 51
Formal Charge 0
Fraction CSP3 0.89
Exact Mass 724.4
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Sansevieria cylindrica Dracaenaceae Plantae 13668

Showing of synonyms

  • Said A, Aboutabl EA, et al. (2015). Steroidal saponins and homoisoflavanone from the aerial parts of Sansevieria cylindrica Bojer ex Hook.. Phytochemistry Letters,2015,12,113-118. [View]
Pubchem: 163047168
Nmrshiftdb2: 70110977

No compound-protein relationship available.

Structure

SMILES: C1C(=O)CC(C12)CCC3C2CC=C4C3C(CCC4)OC(OCCC5)C5OC6CCCCO6

Level: 2

Mol. Weight: 724.89 g/mol

Structure

SMILES: C1C(=O)CC(C12)CCC3C2CC=C4C3C(CCC4)OC5CCCCO5

Level: 1

Mol. Weight: 724.89 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 724.89 g/mol

Structure

SMILES: C1C(=O)CC(C12)CCC3C2CC=C4C3CCCC4

Level: 0

Mol. Weight: 724.89 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 724.89 g/mol

Antioxidant

Absorption

Caco-2 (logPapp)
-6.22
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-2.75
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
381.41

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.88
Plasma Protein Binding
36.48
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
2.46
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-6.37
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.46
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
6.08
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Toxic
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-694388.1
Rat (Acute)
4.56
Rat (Chronic Oral)
3.83
Fathead Minnow
886.6
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
75173.61
Hydration Free Energy
-2.92
Log(D) at pH=7.4
2.47
Log(P)
0.92
Log S
-2.77
Log(Vapor Pressure)
-2403.36
Melting Point
204.99
pKa Acid
1.91
pKa Basic
6.3
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.8436
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.8436
Trichothecene 15-O-acetyltransferase TRI3 Q9C1B7 TRI3_FUSSP Fusarium sporotrichioides 3 0.7876
Trichothecene 15-O-acetyltransferase TRI3 Q9C1B7 TRI3_FUSSP Fusarium sporotrichioides 3 0.7876
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 3 0.7843
Prolyl tripeptidyl peptidase Q7MUW6 PTP_PORGI Porphyromonas gingivalis 3 0.7843

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