Cocciferin D3 - Compound Card

Cocciferin D3

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Cocciferin D3

Structure
Zoomed Structure
  • Family: Plantae - Fagaceae
  • Kingdom: Plantae
  • Class: Tannin
Canonical Smiles O[C@H]1[C@@H](OC2C([C@H]1O)OC(=O)c1cc(O)c(c(c1c1c(C(=O)OC2)cc(c(c1O)O)O)O)O)OC(=O)c1cc(O)c(c(c1Oc1cc2C(=O)O[C@@H]3[C@H](COC(=O)c4c(c2c(c1O)O)c(O)c(c(c4)O)O)OC(=O)c1cc(O)c(c(c1c1c2C(=O)O[C@@H]3[C@@H]3OC(=O)c4c([C@H]3O)c(O)c(c(c4c2c(c(c1O)O)O)O)O)O)O)O)O
InChI InChI=1S/C68H46O44/c69-15-1-9-23(40(80)34(15)74)25-11(3-17(71)36(76)42(25)82)63(98)108-56-21(7-103-60(9)95)107-68(54(94)53(56)93)112-65(100)14-5-19(73)38(78)52(92)55(14)105-20-6-13-26(44(84)39(20)79)24-10(2-16(70)35(75)41(24)81)61(96)104-8-22-57(109-64(13)99)59-58-49(89)33-32(67(102)110-58)30(47(87)51(91)48(33)88)29-31(66(101)111-59)28(45(85)50(90)46(29)86)27-12(62(97)106-22)4-18(72)37(77)43(27)83/h1-6,21-22,49,53-54,56-59,68-94H,7-8H2/t21?,22-,49+,53-,54+,56?,57+,58+,59-,68-/m0/s1
InChIKey DKRPEPQABXORQH-FCJXHYIVSA-N
Formula C68H46O44
HBA 44
HBD 26
MW 1567.07
Rotatable Bonds 4
TPSA 754.84
LogP 1.42
Number Rings 15
Number Aromatic Rings 8
Heavy Atom Count 112
Formal Charge 0
Fraction CSP3 0.18
Exact Mass 1566.14
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Quercus suber Fagaceae Plantae 58331

Showing of synonyms

  • Ito H, Yamaguchi K, et al. (2002). Dimeric and trimeric hydrolyzable tannins from Quercus coccifera and Quercus suber. Journal of Natural Products,2002,65(3),339-345. [View] [PubMed]
Pubchem: 162916529

No compound-protein relationship available.

Structure

SMILES: c1cccc(c1c23)C(=O)OCC4C(OC(=O)c2cccc3)CCC(O4)OC(=O)c5c(cccc5)Oc(c6)ccc(c7c(C(=O)OC8)cccc7)c6C(=O)OC(C(OC9=O)C(OC1=O)Cc2ccc3)C8OC(=O)c(cccc4)c4c(c9c4c3c12)ccc4

Level: 2

Mol. Weight: 1567.07 g/mol

Structure

SMILES: c12c3c4c5c(ccc4)c6c(cccc6)C(=O)OC7C(C(OC5=O)C(OC2=O)Cc1ccc3)OC(=O)c8c(c9c(C(=O)OC7)cccc9)ccc(c8)Oc1ccccc1

Level: 1

Mol. Weight: 1567.07 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(O2)CCC(OC(=O)c3cccc4)C2COC(=O)c(c5c34)cccc5

Level: 1

Mol. Weight: 1567.07 g/mol

Structure

SMILES: c12c3c4c5c(ccc4)c6c(cccc6)C(=O)OC7C(C(OC5=O)C(OC2=O)Cc1ccc3)OC(=O)c8c(cccc8)c9c(C(=O)OC7)cccc9

Level: 0

Mol. Weight: 1567.07 g/mol

Structure

SMILES: c1cccc(c1c23)C(=O)OCC4C(CCCO4)OC(=O)c2cccc3

Level: 0

Mol. Weight: 1567.07 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 1567.07 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.04
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
63092738319904520000000
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
8245480124360659000000000

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
-0.39
Plasma Protein Binding
-2.48
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
8.81
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-191771198493839080000000
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-78302473696915520
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Toxic
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-14965150176304287000000000000
Rat (Acute)
12068775478118.553
Rat (Chronic Oral)
32098932754135080000
Fathead Minnow
18890315299130667000000000
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
1683164597923382000000000000
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-935671570958519200000
Log(P)
-108923205681974400
Log S
-9.79
Log(Vapor Pressure)
-55425753124798680000000000
Melting Point
-16841901102219800000
pKa Acid
-403864095955449900000000
pKa Basic
-3249073980986009600000
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8465
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8465
Polymerase acidic protein Q5EP34 Q5EP34_9INFA Influenza A virus 3 0.7993
Polymerase acidic protein Q5EP34 Q5EP34_9INFA Influenza A virus 3 0.7993
Nuclear receptor subfamily 5 group A member 2 O00482 NR5A2_HUMAN Homo sapiens 4 0.7846
Nuclear receptor subfamily 5 group A member 2 O00482 NR5A2_HUMAN Homo sapiens 4 0.7846
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7839
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7839
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 4 0.7723
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 4 0.7723
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.7540
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.7540
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7307
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.7307
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7240
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7240
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.7171
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.7171
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 5 0.7065
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 5 0.7065

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