Dankamide - Compound Card

Dankamide

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Dankamide

Structure
Zoomed Structure
  • Family: Fungi - Gymnoascaceae
  • Kingdom: Fungi
  • Class: Amide
    • Subclass: Acyl Amide
Canonical Smiles C/C(=C\[C@@H](CC(=O)O)C)/C=C/C(=O)N
InChI InChI=1S/C10H15NO3/c1-7(3-4-9(11)12)5-8(2)6-10(13)14/h3-5,8H,6H2,1-2H3,(H2,11,12)(H,13,14)/b4-3+,7-5+/t8-/m0/s1
InChIKey IMOQARKVTAXVLY-RZFOVTHESA-N
Formula C10H15NO3
HBA 2
HBD 2
MW 197.23
Rotatable Bonds 5
TPSA 80.39
LogP 1.08
Number Rings 0
Number Aromatic Rings 0
Heavy Atom Count 14
Formal Charge 0
Fraction CSP3 0.4
Exact Mass 197.11
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Gymnascella dankaliensis Gymnoascaceae Fungi 166389

Showing of synonyms

  • Hammerschmidt L, Aly AH, et al. (2015). Cytotoxic acyl amides from the soil fungus Gymnascella dankaliensis. Bioorganic and Medicinal Chemistry,2015,23,712-719. [View] [PubMed]

No compound-protein relationship available.

No scaffolds available.

Cytotoxic

Absorption

Caco-2 (logPapp)
-4.82
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.47
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.11

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.37
Plasma Protein Binding
47.79
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
4.17
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-0.13
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
1.13
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
3.36
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
1.49
Rat (Acute)
1.68
Rat (Chronic Oral)
1.78
Fathead Minnow
3.95
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
334.12
Hydration Free Energy
-10.37
Log(D) at pH=7.4
-1.3
Log(P)
0.91
Log S
-2.09
Log(Vapor Pressure)
-7.04
Melting Point
176.26
pKa Acid
6.01
pKa Basic
6.16
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Cytochrome P450 Q93H81 Q93H81_STRAX Streptomyces avermitilis 3 0.9679
Cytochrome P450 Q93H81 Q93H81_STRAX Streptomyces avermitilis 3 0.9679
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.9474
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.9474
Branched-chain-amino-acid aminotransferase, mitochondrial O15382 BCAT2_HUMAN Homo sapiens 3 0.9302
Branched-chain-amino-acid aminotransferase, mitochondrial O15382 BCAT2_HUMAN Homo sapiens 3 0.9302
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.9038
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.9038
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.9014
Phospholipase A2, major isoenzyme P00592 PA21B_PIG Sus scrofa 3 0.9014
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase B1MKD5 B1MKD5_MYCA9 Mycobacteroides abscessus 3 0.8952
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase B1MKD5 B1MKD5_MYCA9 Mycobacteroides abscessus 3 0.8952
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8574
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8574
Gastrotropin Q6IMW5 Q6IMW5_DANRE Danio rerio 3 0.8485
Gastrotropin Q6IMW5 Q6IMW5_DANRE Danio rerio 3 0.8485
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8026
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.8026
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7998
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7998
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7985
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7985
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7850
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7850
Deacetoxycephalosporin C synthase P18548 CEFE_STRCL Streptomyces clavuligerus 3 0.7746
Deacetoxycephalosporin C synthase P18548 CEFE_STRCL Streptomyces clavuligerus 3 0.7746
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 3 0.7727
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 3 0.7727
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.7625
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.7625
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7614
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7614
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7588
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7588
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7586
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7586
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7556
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7556
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 2 0.7550
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 2 0.7550
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7512
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7512
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7506
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7506
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.7493
Raucaffricine-O-beta-D-glucosidase Q9SPP9 RG1_RAUSE Rauvolfia serpentina 3 0.7493
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.7493
Raucaffricine-O-beta-D-glucosidase Q9SPP9 RG1_RAUSE Rauvolfia serpentina 3 0.7493
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7486
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7486
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7332
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7332
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7327
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7327
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7300
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7300
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7298
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7298
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7296
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7296
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7287
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7287
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 2 0.7230
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 2 0.7230
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase P19992 HSD_STREX Streptomyces exfoliatus 2 0.7230
3-alpha-(or 20-beta)-hydroxysteroid dehydrogenase P19992 HSD_STREX Streptomyces exfoliatus 2 0.7230
Nuclear receptor subfamily 1 group I member 3 O35627 NR1I3_MOUSE Mus musculus 3 0.7219
Nuclear receptor subfamily 1 group I member 3 O35627 NR1I3_MOUSE Mus musculus 3 0.7219
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 3 0.7171
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 3 0.7171
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7128
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7128
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase B1MKD5 B1MKD5_MYCA9 Mycobacteroides abscessus 3 0.7126
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase B1MKD5 B1MKD5_MYCA9 Mycobacteroides abscessus 3 0.7126
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7123
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7123
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 3 0.7091
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 3 0.7091
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7042
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7042
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 2 0.7023
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 2 0.7023
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 3 0.7020
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 3 0.7020
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7014
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7014

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