(-)-pseudosemiglabrin - Compound Card

(-)-pseudosemiglabrin

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(-)-pseudosemiglabrin

Structure
Zoomed Structure
  • Family: Plantae - Leguminosae/Fabaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavanone
Canonical Smiles CC(=O)O[C@H]1[C@@H]2[C@H](OC1(C)C)Oc1c2c2oc(cc(=O)c2cc1)c1ccccc1
InChI InChI=1S/C23H20O6/c1-12(24)26-21-19-18-16(28-22(19)29-23(21,2)3)10-9-14-15(25)11-17(27-20(14)18)13-7-5-4-6-8-13/h4-11,19,21-22H,1-3H3/t19-,21+,22+/m1/s1
InChIKey XTIQPKJOGKMOSY-HJNYFJLDSA-N
Formula C23H20O6
HBA 6
HBD 0
MW 392.41
Rotatable Bonds 2
TPSA 74.97
LogP 4.0
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 29
Formal Charge 0
Fraction CSP3 0.3
Exact Mass 392.13
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Tephrosia apollinea Leguminosae/Fabaceae Plantae 1390541

Showing of synonyms

  • Hassan LEA, Ahamed MBK, et al. (2014). Crystal structure elucidation and anticancer studies of (-)-pseudosemiglabrin: a flavanone isolated from the aerial parts of Tephrosia apollinea. PLoS One,2014,9(6),e90806. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CCC2C1Oc(c23)ccc4c3oc(cc4=O)-c5ccccc5

Level: 1

Mol. Weight: 392.41 g/mol

Structure

SMILES: O1CCC2C1Oc(c23)ccc4c3occc4=O

Level: 0

Mol. Weight: 392.41 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 392.41 g/mol

Antiproliferative

Absorption

Caco-2 (logPapp)
-4.86
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.5
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.1

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.4
Plasma Protein Binding
96.31
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.26
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.76
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.39
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.85
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-26.89
Rat (Acute)
3.45
Rat (Chronic Oral)
1.35
Fathead Minnow
5.08
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
481.38
Hydration Free Energy
-5.08
Log(D) at pH=7.4
3.62
Log(P)
3.93
Log S
-5.16
Log(Vapor Pressure)
-8.83
Melting Point
186.36
pKa Acid
8.87
pKa Basic
2.97
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.9264
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.9264
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.9196
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.9196
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.9088
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.9088
Serine/threonine-protein kinase 10 O94804 STK10_HUMAN Homo sapiens 3 0.9044
Serine/threonine-protein kinase 10 O94804 STK10_HUMAN Homo sapiens 3 0.9044
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8954
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8954
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8875
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8875
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.8693
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.8693
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.8649
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.8649
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8567
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8567
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8257
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8257
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.8053
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.8053
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8046
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8046
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7902
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7902
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 3 0.7899
Peroxisome proliferator-activated receptor gamma P37231 PPARG_HUMAN Homo sapiens 3 0.7899
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 3 0.7885
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 3 0.7885
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 2 0.7730
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 2 0.7730
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7716
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7716
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 3 0.7709
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 3 0.7709
Glucose-1-phosphate thymidylyltransferase Q9HU22 Q9HU22_PSEAE Pseudomonas aeruginosa 3 0.7661
Glucose-1-phosphate thymidylyltransferase Q9HU22 Q9HU22_PSEAE Pseudomonas aeruginosa 3 0.7661
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 2 0.7580
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 2 0.7580
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7574
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7574
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.7472
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.7472
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 2 0.7442
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 2 0.7442
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7431
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7431
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7375
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7375
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7367
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7367
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.7352
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.7352
CCA-adding enzyme O28126 CCA_ARCFU Archaeoglobus fulgidus 2 0.7341
CCA-adding enzyme O28126 CCA_ARCFU Archaeoglobus fulgidus 2 0.7341
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7285
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7285
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7283
Methionine aminopeptidase P0AE18 MAP1_ECOLI Escherichia coli 3 0.7283
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7277
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7277
Angiopoietin-1 receptor Q02763 TIE2_HUMAN Homo sapiens 3 0.7260
Angiopoietin-1 receptor Q02763 TIE2_HUMAN Homo sapiens 3 0.7260
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7237
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 3 0.7237
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7227
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7227
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7147
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7147
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7146
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7146
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.7132
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.7132
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 2 0.7119
Ras-related protein Ral-B P11234 RALB_HUMAN Homo sapiens 2 0.7119
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7110
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7110
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7107
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7107
Plasma membrane ATPase Q42932 Q42932_NICPL Nicotiana plumbaginifolia 2 0.7086
Plasma membrane ATPase Q42932 Q42932_NICPL Nicotiana plumbaginifolia 2 0.7086
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.7082
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 4 0.7082
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7066
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7066
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7061
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7061
Angiotensin-converting enzyme 2 Q9BYF1 ACE2_HUMAN Homo sapiens 2 0.7047
Angiotensin-converting enzyme 2 Q9BYF1 ACE2_HUMAN Homo sapiens 2 0.7047
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7013
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7013
Enoyl-[acyl-carrier-protein] reductase [NADH] P9WGR1 INHA_MYCTU Mycobacterium tuberculosis 3 0.7005
Enoyl-[acyl-carrier-protein] reductase [NADH] P9WGR1 INHA_MYCTU Mycobacterium tuberculosis 3 0.7005

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