Asphodoside E - Compound Card

Asphodoside E

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Asphodoside E

Structure
Zoomed Structure
  • Family: Plantae - Liliaceae
  • Kingdom: Plantae
  • Class: Quinone
    • Subclass: Anthraquinone
Canonical Smiles OCc1cc(O)c2c(c1)[C@@](O)(c1ccc3c(c1O)C(=O)c1c([C@]3(O)C3O[C@H](CO)[C@@H]([C@H]([C@H]3O)O)O)cc(cc1O)C)c1c(C2=O)c(O)ccc1
InChI InChI=1S/C36H32O14/c1-13-7-18-25(21(40)8-13)31(45)27-16(36(18,49)34-33(47)32(46)29(43)23(12-38)50-34)5-6-17(28(27)42)35(48)15-3-2-4-20(39)24(15)30(44)26-19(35)9-14(11-37)10-22(26)41/h2-10,23,29,32-34,37-43,46-49H,11-12H2,1H3/t23-,29+,32-,33-,34?,35+,36+/m1/s1
InChIKey QZRROKPCMGVLEO-LSKZQVIMSA-N
Formula C36H32O14
HBA 14
HBD 11
MW 688.64
Rotatable Bonds 4
TPSA 265.9
LogP -0.24
Number Rings 7
Number Aromatic Rings 4
Heavy Atom Count 50
Formal Charge 0
Fraction CSP3 0.28
Exact Mass 688.18
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Asphodelus microcarpus Liliaceae Plantae 49697

Showing of synonyms

  • Ghoneim MM, Elokely KM, et al. (2014). Asphodosides A-E, anti-MRSA metabolites from Asphodelus microcarpus. Phytochemistry,2014,105,79-84. [View] [PubMed]
Pubchem: 162817161

No compound-protein relationship available.

Structure

SMILES: c1cccc(C2=O)c1C(C3CCCCO3)c(c24)ccc(c4)C(c(c56)cccc6)c7c(C5=O)cccc7

Level: 2

Mol. Weight: 688.64 g/mol

Structure

SMILES: c1cccc(C2=O)c1C(c(c23)cccc3)c(c4)ccc(c45)Cc6c(C5=O)cccc6

Level: 1

Mol. Weight: 688.64 g/mol

Structure

SMILES: O1CCCCC1C(c(c23)cccc3)c4c(C2=O)cccc4

Level: 1

Mol. Weight: 688.64 g/mol

Structure

SMILES: c1cccc(c12)Cc3c(C2=O)cccc3

Level: 0

Mol. Weight: 688.64 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 688.64 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.03
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.3
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
297.02

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.55
Plasma Protein Binding
70.07
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
7.58
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-5.1
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
1.06
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.34
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-533415.09
Rat (Acute)
2.52
Rat (Chronic Oral)
5.36
Fathead Minnow
685.5
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
51735.26
Hydration Free Energy
-2.92
Log(D) at pH=7.4
0.1
Log(P)
2.85
Log S
-4.24
Log(Vapor Pressure)
-1732.1
Melting Point
187.13
pKa Acid
3.92
pKa Basic
6.8
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
HTH-type transcriptional regulator QacR P0A0N3 QACR_STAAM Staphylococcus aureus 3 0.7900
HTH-type transcriptional regulator QacR P0A0N3 QACR_STAAM Staphylococcus aureus 3 0.7900
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.7842
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.7842
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 3 0.7501
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 3 0.7501
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7383
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7383
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7310
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7310
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7094
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7094
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7059
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7059

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