Costunolide - Compound Card

Costunolide

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Costunolide

Structure
Zoomed Structure
  • Family: Plantae - Asteraceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Sesquiterpene Lactone
Canonical Smiles C/C/1=C\[C@H]2OC(=O)C(=C)[C@@H]2CC/C(=C/CC1)/C
InChI InChI=1S/C15H20O2/c1-10-5-4-6-11(2)9-14-13(8-7-10)12(3)15(16)17-14/h5,9,13-14H,3-4,6-8H2,1-2H3/b10-5+,11-9+/t13-,14+/m0/s1
InChIKey HRYLQFBHBWLLLL-AHNJNIBGSA-N
Formula C15H20O2
HBA 2
HBD 0
MW 232.32
Rotatable Bonds 0
TPSA 26.3
LogP 3.55
Number Rings 2
Number Aromatic Rings 0
Heavy Atom Count 17
Formal Charge 0
Fraction CSP3 0.53
Exact Mass 232.15
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Magnolia grandiflora Magnoliaceae Plantae 3406
2 Centaurea acaulis Asteraceae Plantae 2969722
3 Saussurea lappa Asteraceae Plantae 324593

Showing of synonyms

  • Bentamène A, Benayache S, et al. (2005). A new guaianolide and other sesquiterpene lactones from Centaurea acaulis L. (Asteraceae). Biochemical Systematics and Ecology,2005,33,1061-1065. [View]
  • Abdelgaleil SAM, Hashinaga F (2007). Allelopathic potential of two sesquiterpene lactones from Magnolia grandiflora L.. Biochemical Systematics and Ecology,2007,35(11),737-742. [View]
  • Barrero AF, Oltra JE, et al. (2000). New sources and antifungal activity of sesquiterpene lactones. Fitoterapia,2000,71,60-64. [View] [PubMed]
Pubchem: 5281437
Kegg Ligand: C09382
Chebi: 3900
Nmrshiftdb2: 60024312
Metabolights: MTBLC3900
Bindingdb: 50411242
Selleck: Costunolide
CPRiL: 58686
Structure

SMILES: C=C1C(=O)OC(C12)C=CCCC=CCC2

Level: 0

Mol. Weight: 232.32 g/mol

Allelopathic
Antifungal

Absorption

Caco-2 (logPapp)
-4.83
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.23
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.55

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.66
Plasma Protein Binding
56.66
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.95
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.55
Biodegradation
Toxic
Carcinogenesis
Toxic
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.35
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
5.04
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
3.09
Rat (Acute)
1.77
Rat (Chronic Oral)
1.97
Fathead Minnow
4.59
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
309.48
Hydration Free Energy
-3.73
Log(D) at pH=7.4
2.99
Log(P)
3.71
Log S
-4.39
Log(Vapor Pressure)
-3.61
Melting Point
58.29
pKa Acid
9.6
pKa Basic
5.97
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8851
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8851
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.8234
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.8234
Abscisic acid receptor PYR1 O49686 PYR1_ARATH Arabidopsis thaliana 3 0.8233
Abscisic acid receptor PYR1 O49686 PYR1_ARATH Arabidopsis thaliana 3 0.8233
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7968
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7968
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7898
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7898
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7871
Nuclear receptor ROR-gamma P51449 RORG_HUMAN Homo sapiens 2 0.7871
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7848
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7848
Nuclear receptor subfamily 1 group I member 3 O35627 NR1I3_MOUSE Mus musculus 2 0.7765
Nuclear receptor subfamily 1 group I member 3 O35627 NR1I3_MOUSE Mus musculus 2 0.7765
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 2 0.7742
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 2 0.7742
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7738
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7738
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 2 0.7713
Prostaglandin reductase 2 Q8N8N7 PTGR2_HUMAN Homo sapiens 2 0.7713
Aromatase P11511 CP19A_HUMAN Homo sapiens 2 0.7708
Aromatase P11511 CP19A_HUMAN Homo sapiens 2 0.7708
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7700
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7700
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.7631
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.7631
Abscisic acid receptor PYL9 Q84MC7 PYL9_ARATH Arabidopsis thaliana 3 0.7610
Abscisic acid receptor PYL9 Q84MC7 PYL9_ARATH Arabidopsis thaliana 3 0.7610
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7597
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7597
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7590
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7590
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7566
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7566
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7547
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7547
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.7538
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.7538
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7518
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7518
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7486
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7486
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7479
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7479
Beta-lactoglobulin P02754 LACB_BOVIN Bos taurus 2 0.7475
Beta-lactoglobulin P02754 LACB_BOVIN Bos taurus 2 0.7475
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7465
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7465
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7426
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7426
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7386
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7386
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.7383
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.7383
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 2 0.7331
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 2 0.7331
Alcohol dehydrogenase 1C P00326 ADH1G_HUMAN Homo sapiens 2 0.7330
Alcohol dehydrogenase 1C P00326 ADH1G_HUMAN Homo sapiens 2 0.7330
Mineralocorticoid receptor P08235 MCR_HUMAN Homo sapiens 2 0.7322
Mineralocorticoid receptor P08235 MCR_HUMAN Homo sapiens 2 0.7322
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7319
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7319
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7318
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7318
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7299
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 2 0.7299
Fatty acid-binding protein 10-A, liver basic Q9I8L5 FA10A_DANRE Danio rerio 2 0.7279
Fatty acid-binding protein 10-A, liver basic Q9I8L5 FA10A_DANRE Danio rerio 2 0.7279
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7278
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 2 0.7278
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7272
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7272
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7257
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7257
Phosphotriesterase Q5KZU5 Q5KZU5_GEOKA Geobacillus kaustophilus 2 0.7256
Phosphotriesterase Q5KZU5 Q5KZU5_GEOKA Geobacillus kaustophilus 2 0.7256
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 2 0.7244
Progesterone receptor P06401 PRGR_HUMAN Homo sapiens 2 0.7244
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7229
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7229
Abscisic acid receptor PYL9 Q84MC7 PYL9_ARATH Arabidopsis thaliana 2 0.7214
Abscisic acid receptor PYL9 Q84MC7 PYL9_ARATH Arabidopsis thaliana 2 0.7214
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7173
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7173
Trichodiene synthase P13513 TRI5_FUSSP Fusarium sporotrichioides 2 0.7172
Trichodiene synthase P13513 TRI5_FUSSP Fusarium sporotrichioides 2 0.7172
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7169
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7169
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7168
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7168
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7154
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7154
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7154
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7154
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7138
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7138
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7126
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7126
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7093
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7093
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7084
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7084
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7071
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7071
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7017
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7017

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