Khayanolide B - Compound Card

Khayanolide B

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Khayanolide B

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Limonoid
Canonical Smiles COC(=O)[C@H]([C@H]1[C@@]2(C)C[C@]3([C@]1(C)C1CC[C@@]4([C@@]5([C@]1([C@H]3[C@H]([C@H]2O)O5)O)CC(=O)O[C@H]4c1ccoc1)C)O)O
InChI InChI=1S/C27H34O10/c1-22-11-25(32)18-16(19(22)30)37-26-9-14(28)36-20(12-6-8-35-10-12)23(26,2)7-5-13(27(18,26)33)24(25,3)17(22)15(29)21(31)34-4/h6,8,10,13,15-20,29-30,32-33H,5,7,9,11H2,1-4H3/t13?,15-,16+,17-,18-,19+,20-,22+,23-,24+,25-,26+,27-/m0/s1
InChIKey ZDYKUDUSNJTTKV-FKVNRSASSA-N
Formula C27H34O10
HBA 10
HBD 4
MW 518.56
Rotatable Bonds 3
TPSA 155.89
LogP 0.85
Number Rings 7
Number Aromatic Rings 1
Heavy Atom Count 37
Formal Charge 0
Fraction CSP3 0.78
Exact Mass 518.22
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Khaya senegalensis Meliaceae Plantae 587579
2 Khaya senegalensis Meliaceae Plantae 587579
3 Khaya senegalensis Meliaceae Plantae 587579

Showing of synonyms

  • Nakatani M, Abdelgaleil SA, et al. (2001). Antifeedant rings B and D opened limonoids from Khaya senegalensis. Journal of Natural Products,2001,64(10),1261-1265. [View] [PubMed]
  • Nakatani M, Abdelgaleil SAM, et al. (2000). Khayanolides A and B, new rearranged phragmalin limonoid antifeedants from Khaya senegalensis. Tetrahedron Letters,2000,41(33),6473-6477. [View]
  • Abdelgaleil SAM, Okamura H, et al. (2001). Khayanolides, rearranged phragmalin limonoid antifeedants from Khaya senegalensis. Tetrahedron,2001,57(1),119-126. [View]
Pubchem: 101069233

No compound-protein relationship available.

Structure

SMILES: c1occc1C(OC(=O)C2)C3CCC4C(C5C6C4C237)CC(C5)CC6O7

Level: 1

Mol. Weight: 518.56 g/mol

Structure

SMILES: O1C2CC(C3)CC(C3C2C4C156)C4CCC5COC(=O)C6

Level: 0

Mol. Weight: 518.56 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 518.56 g/mol

Antifeedant
Antiviral

Absorption

Caco-2 (logPapp)
-5.96
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-5.020
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-0.45

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.610
Plasma Protein Binding
80.94
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
2.610
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-2.200
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.470
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
7.450
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1338.280
Rat (Acute)
4.680
Rat (Chronic Oral)
3.390
Fathead Minnow
2.580
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
451.950
Hydration Free Energy
-2.930
Log(D) at pH=7.4
1.610
Log(P)
1.01
Log S
-2.97
Log(Vapor Pressure)
-11.22
Melting Point
233.82
pKa Acid
5.16
pKa Basic
4.99
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7782
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7782
AcsD Q93AT8 Q93AT8_DICCH Dickeya chrysanthemi 3 0.7655
AcsD Q93AT8 Q93AT8_DICCH Dickeya chrysanthemi 3 0.7655
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7625
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7625
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 2 0.7051
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 2 0.7051

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