2-hydroxyseneganolide - Compound Card

2-hydroxyseneganolide

Select a section from the left sidebar

2-hydroxyseneganolide

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Limonoid
Canonical Smiles O=C1O[C@@H](c2ccoc2)[C@]2([C@@H](C1)[C@@]13O[C@]4(C(C1)(O)C(=O)C([C@H]1[C@]4([C@H]3CC2)COC(=O)C1)(C)C)O)C
InChI InChI=1S/C26H30O9/c1-21(2)15-8-17(27)33-12-23(15)14-4-6-22(3)16(9-18(28)34-19(22)13-5-7-32-10-13)24(14)11-25(30,20(21)29)26(23,31)35-24/h5,7,10,14-16,19,30-31H,4,6,8-9,11-12H2,1-3H3/t14-,15+,16-,19+,22-,23-,24-,25?,26-/m1/s1
InChIKey KZFPZDFHHOUZCZ-FGUWIFBCSA-N
Formula C26H30O9
HBA 9
HBD 2
MW 486.52
Rotatable Bonds 1
TPSA 132.5
LogP 2.05
Number Rings 7
Number Aromatic Rings 1
Heavy Atom Count 35
Formal Charge 0
Fraction CSP3 0.73
Exact Mass 486.19
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Khaya senegalensis Meliaceae Plantae 587579

Showing of synonyms

  • Nakatani M, Abdelgaleil SA, et al. (2001). Antifeedant rings B and D opened limonoids from Khaya senegalensis. Journal of Natural Products,2001,64(10),1261-1265. [View] [PubMed]
Pubchem: 102019659

No compound-protein relationship available.

Structure

SMILES: c1occc1C(OC(=O)C2)C(CC3)C2C4(C3C567)CC(C5O4)C(=O)CC6CC(=O)OC7

Level: 1

Mol. Weight: 486.52 g/mol

Structure

SMILES: C1C(=O)OCC(CC2)C1C3(C2C456)CC(C4O3)C(=O)CC5CC(=O)OC6

Level: 0

Mol. Weight: 486.52 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 486.52 g/mol

Antifeedant
Antiviral

Absorption

Caco-2 (logPapp)
-5.42
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.99
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-1.66

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.63
Plasma Protein Binding
68.5
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
4.24
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.48
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.8
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
7.28
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-583.51
Rat (Acute)
4.64
Rat (Chronic Oral)
2.56
Fathead Minnow
3.81
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
464.0
Hydration Free Energy
-2.84
Log(D) at pH=7.4
1.67
Log(P)
1.46
Log S
-4.44
Log(Vapor Pressure)
-10.93
Melting Point
312.31
pKa Acid
4.64
pKa Basic
4.18
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7791
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7791
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.7446
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.7446
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7416
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7416
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7381
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7381
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.7341
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.7341
Nucleoside diphosphate kinase Q5UQL3 NDK_MIMIV Acanthamoeba polyphaga mimivirus 2 0.7142
Nucleoside diphosphate kinase Q5UQL3 NDK_MIMIV Acanthamoeba polyphaga mimivirus 2 0.7142
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7087
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7087

Download SDF