Seneganolide - Compound Card

Seneganolide

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Seneganolide

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Limonoid
Canonical Smiles O=C1O[C@@H](c2ccoc2)[C@]2([C@@H](C1)[C@]13C[C@@H]4[C@](O1)([C@@]1([C@H]3CC2)COC(=O)C[C@H]1C(C4=O)(C)C)O)C
InChI InChI=1S/C26H30O8/c1-22(2)16-8-18(27)32-12-24(16)15-4-6-23(3)17(9-19(28)33-21(23)13-5-7-31-11-13)25(15)10-14(20(22)29)26(24,30)34-25/h5,7,11,14-17,21,30H,4,6,8-10,12H2,1-3H3/t14-,15+,16-,17+,21-,23+,24+,25+,26-/m0/s1
InChIKey VIOKSDWKSSMHBF-MQELVVIJSA-N
Formula C26H30O8
HBA 8
HBD 1
MW 470.52
Rotatable Bonds 1
TPSA 112.27
LogP 2.94
Number Rings 7
Number Aromatic Rings 1
Heavy Atom Count 34
Formal Charge 0
Fraction CSP3 0.73
Exact Mass 470.19
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Khaya senegalensis Meliaceae Plantae 587579
2 Khaya senegalensis Meliaceae Plantae 587579

Showing of synonyms

  • Nakatani M, Abdelgaleil SA, et al. (2001). Antifeedant rings B and D opened limonoids from Khaya senegalensis. Journal of Natural Products,2001,64(10),1261-1265. [View] [PubMed]
  • Abdelgaleil SAM, Okamura H, et al. (2001). Khayanolides, rearranged phragmalin limonoid antifeedants from Khaya senegalensis. Tetrahedron,2001,57(1),119-126. [View]

No compound-protein relationship available.

Structure

SMILES: c1occc1C(OC(=O)C2)C(CC3)C2C4(C3C567)CC(C5O4)C(=O)CC6CC(=O)OC7

Level: 1

Mol. Weight: 470.52 g/mol

Structure

SMILES: C1C(=O)OCC(CC2)C1C3(C2C456)CC(C4O3)C(=O)CC5CC(=O)OC6

Level: 0

Mol. Weight: 470.52 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 470.52 g/mol

Antifeedant
Antiviral

Absorption

Caco-2 (logPapp)
-5.42
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.99
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.67

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.81
Plasma Protein Binding
66.9
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.36
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.06
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-1.16
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
6.82
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-423.82
Rat (Acute)
5.17
Rat (Chronic Oral)
2.38
Fathead Minnow
4.01
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
498.08
Hydration Free Energy
-2.93
Log(D) at pH=7.4
1.84
Log(P)
1.79
Log S
-5.32
Log(Vapor Pressure)
-10.41
Melting Point
308.67
pKa Acid
5.28
pKa Basic
4.26
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7713
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7713
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7346
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7346
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7312
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7312
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.7279
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.7279
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 3 0.7034
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 3 0.7034
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7014
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7014

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