2-hydroxyswietenine - Compound Card

2-hydroxyswietenine

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2-hydroxyswietenine

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Limonoid
Canonical Smiles C/C=C(/OC(=O)[C@H]1C(C)(C)[C@H]([C@H](C(=O)OC)O)[C@@]2(C(=O)[C@@]1(O)C=C1[C@@H]2CC[C@@]2([C@H]1CC(=O)O[C@H]2c1ccoc1)C)C)\C
InChI InChI=1S/C32H40O10/c1-8-16(2)41-27(36)24-29(3,4)23(22(34)26(35)39-7)31(6)19-9-11-30(5)20(18(19)14-32(24,38)28(31)37)13-21(33)42-25(30)17-10-12-40-15-17/h8,10,12,14-15,19-20,22-25,34,38H,9,11,13H2,1-7H3/b16-8+/t19-,20-,22+,23-,24-,25-,30+,31+,32+/m0/s1
InChIKey OKSOKDSKQGUUCI-YXRPLECISA-N
Formula C32H40O10
HBA 10
HBD 2
MW 584.66
Rotatable Bonds 5
TPSA 149.57
LogP 3.82
Number Rings 5
Number Aromatic Rings 1
Heavy Atom Count 42
Formal Charge 0
Fraction CSP3 0.62
Exact Mass 584.26
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Swietenia mahogani Meliaceae Plantae 459165

Showing of synonyms

  • Abdelgaleil SA, Doe M, et al. (2013). Rings B,D-seco limonoid antifeedants from Swietenia mahogani. Phytochemistry,2013,96,312-317. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: c1occc1C2OC(=O)CC3C2CCC(C3=4)C5C(=O)C(C4)CCC5

Level: 1

Mol. Weight: 584.66 g/mol

Structure

SMILES: C1CCC(C2)C(=O)C1C(C=23)CCC4C3CC(=O)OC4

Level: 0

Mol. Weight: 584.66 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 584.66 g/mol

Antifeedant

Absorption

Caco-2 (logPapp)
-5.3
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.81
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
2.17

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.84
Plasma Protein Binding
89.5
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
10.42
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.95
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.14
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
8.08
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Toxic
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-7483.38
Rat (Acute)
4.08
Rat (Chronic Oral)
2.63
Fathead Minnow
22.79
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
373.54
Hydration Free Energy
-2.92
Log(D) at pH=7.4
3.48
Log(P)
3.53
Log S
-5.26
Log(Vapor Pressure)
-12.27
Melting Point
235.73
pKa Acid
6.38
pKa Basic
2.71
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8913
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8913
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8492
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8492
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8474
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8474
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.8384
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.8384
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8340
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8340
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8275
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8275
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 2 0.8223
Mycocyclosin synthase P9WPP7 CP121_MYCTU Mycobacterium tuberculosis 2 0.8223
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8070
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.8070
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7980
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7980
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7875
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7875
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7762
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7762
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7740
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7740
glutaryl-CoA dehydrogenase (ETF) Q3JP94 Q3JP94_BURP1 Burkholderia pseudomallei 2 0.7696
glutaryl-CoA dehydrogenase (ETF) Q3JP94 Q3JP94_BURP1 Burkholderia pseudomallei 2 0.7696
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7695
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7695
Bifunctional dihydrofolate reductase-thymidylate synthase P13922 DRTS_PLAFK Plasmodium falciparum 2 0.7683
Bifunctional dihydrofolate reductase-thymidylate synthase P13922 DRTS_PLAFK Plasmodium falciparum 2 0.7683
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7640
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7640
cGMP-dependent protein kinase 2 Q13237 KGP2_HUMAN Homo sapiens 2 0.7563
cGMP-dependent protein kinase 2 Q13237 KGP2_HUMAN Homo sapiens 2 0.7563
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7542
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7542
Carminomycin 4-O-methyltransferase DnrK Q06528 DNRK_STRPE Streptomyces peucetius 3 0.7500
Carminomycin 4-O-methyltransferase DnrK Q06528 DNRK_STRPE Streptomyces peucetius 3 0.7500
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7481
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.7481
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7460
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7460
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 3 0.7458
Casein kinase II subunit alpha' P19784 CSK22_HUMAN Homo sapiens 3 0.7458
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7421
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7421
Probable esterase KAI2 Q9SZU7 KAI2_ARATH Arabidopsis thaliana 3 0.7408
Probable esterase KAI2 Q9SZU7 KAI2_ARATH Arabidopsis thaliana 3 0.7408
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7380
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7380
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.7368
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.7368
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7305
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7305
NADH:flavin oxidoreductase Sye1 Q8EEC8 Q8EEC8_SHEON Shewanella oneidensis 2 0.7304
NADH:flavin oxidoreductase Sye1 Q8EEC8 Q8EEC8_SHEON Shewanella oneidensis 2 0.7304
Thymidine kinase P0DTH5 KITH_HHV11 Human herpesvirus 1 3 0.7247
Thymidine kinase P0DTH5 KITH_HHV11 Human herpesvirus 1 3 0.7247
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.7194
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 3 0.7194
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7157
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7157
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7129
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7129

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