Swietenialide B - Compound Card

Swietenialide B

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Swietenialide B

Structure
Zoomed Structure
  • Family: Plantae - Meliaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Limonoid
Canonical Smiles COC(=O)CC1[C@@]2(C)CC3(C1(C)C14OC5(OC4(C4C3([C@H]2OC(=O)/C(=C\C)/C)O[C@](O4)(CC)OC)C(O5)([C@](CC1O)(C)[C@H](c1ccoc1)OC(=O)C)CC(=O)OC)C)O
InChI InChI=1S/C41H54O17/c1-12-21(3)29(46)53-30-32(5)20-36(47)34(7,24(32)16-26(44)48-9)40-25(43)17-33(6,28(52-22(4)42)23-14-15-51-19-23)37(18-27(45)49-10)41(40,57-35(8,55-37)56-40)31-39(30,36)58-38(13-2,50-11)54-31/h12,14-15,19,24-25,28,30-31,43,47H,13,16-18,20H2,1-11H3/b21-12-/t24?,25?,28-,30-,31?,32+,33-,34?,35?,36?,37?,38+,39?,40?,41?/m0/s1
InChIKey UHYLXNDBODUIRM-BBJPVVENSA-N
Formula C41H54O17
HBA 17
HBD 2
MW 818.87
Rotatable Bonds 11
TPSA 214.18
LogP 3.28
Number Rings 8
Number Aromatic Rings 1
Heavy Atom Count 58
Formal Charge 0
Fraction CSP3 0.76
Exact Mass 818.34
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Swietenia mahogani Meliaceae Plantae 459165

Showing of synonyms

  • Saad MMG, Iwagawa T, et al. (2003). Swietenialides, novel ring D opened phragmalin limonoid orthoesters from Swietenia mahogani JACQ.. Tetrahedron,2003,59(40),8027-8033. [View]
Pubchem: 101758880

No compound-protein relationship available.

Structure

SMILES: c1occc1CC(C2OC(O3)O4)CCC4(C235)C6C7C8(C5OCO8)CC(C6)C7

Level: 1

Mol. Weight: 818.87 g/mol

Structure

SMILES: O1COC2C1(CC(C3)C4)C4C3C5(C267)CCCC6OC(O7)O5

Level: 0

Mol. Weight: 818.87 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 818.87 g/mol

Antifeedant

Absorption

Caco-2 (logPapp)
-5.47
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
84.130
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
11692.0

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.320
Plasma Protein Binding
67.35
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
5.960
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-274.710
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.280
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
5.270
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-21221875.860
Rat (Acute)
4.950
Rat (Chronic Oral)
3.320
Fathead Minnow
26794.670
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
2382845.900
Hydration Free Energy
-2.920
Log(D) at pH=7.4
3.080
Log(P)
3.81
Log S
-5.09
Log(Vapor Pressure)
-78420.06
Melting Point
188.89
pKa Acid
-516.14
pKa Basic
0.35
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7150
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7150

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