Isorhamnetin 3-O-4Rham-galactosylrobinobioside - Compound Card

Isorhamnetin 3-O-4Rham-galactosylrobinobioside

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Isorhamnetin 3-O-4Rham-galactosylrobinobioside

Structure
Zoomed Structure
  • Family: Plantae - Nitrariaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonol Glycoside
Canonical Smiles OCC1O[C@@H](O[C@H]2C(C)O[C@H](C([C@H]2O)O)OCC2O[C@@H](Oc3c(oc4c(c3=O)c(O)cc(c4)O)c3ccc(c(c3)OC)O)C(C([C@H]2O)O)O)C([C@H]([C@H]1O)O)O
InChI InChI=1S/C34H42O21/c1-10-29(54-33-26(45)23(42)20(39)17(8-35)52-33)25(44)28(47)32(50-10)49-9-18-21(40)24(43)27(46)34(53-18)55-31-22(41)19-14(38)6-12(36)7-16(19)51-30(31)11-3-4-13(37)15(5-11)48-2/h3-7,10,17-18,20-21,23-29,32-40,42-47H,8-9H2,1-2H3/t10?,17?,18?,20-,21-,23-,24?,25+,26?,27?,28?,29-,32+,33-,34-/m0/s1
InChIKey SBEPSCJFOSFEPL-JVRFTMPWSA-N
Formula C34H42O21
HBA 21
HBD 12
MW 786.69
Rotatable Bonds 10
TPSA 337.58
LogP -3.56
Number Rings 6
Number Aromatic Rings 3
Heavy Atom Count 55
Formal Charge 0
Fraction CSP3 0.56
Exact Mass 786.22
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Nitraria retusa Nitrariaceae Plantae 43875

Showing of synonyms

  • Halim AF, Saad HE, et al. (1995). Flavonol glycosides from Nitraria retusa. Phytochemistry,1995,40(1),349-351. [View] [PubMed]
Pubchem: 44259341

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OC2CCC(OC2)OCC3CCCC(O3)Oc(c4=O)c(-c5ccccc5)oc(c46)cccc6

Level: 4

Mol. Weight: 786.69 g/mol

Structure

SMILES: O1CCCCC1OC2CCC(OC2)OCC3CCCC(O3)Oc(c4=O)coc(c45)cccc5

Level: 3

Mol. Weight: 786.69 g/mol

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)Oc(c3=O)c(-c4ccccc4)oc(c35)cccc5

Level: 3

Mol. Weight: 786.69 g/mol

Structure

SMILES: O1CCCCC1OCC2CCCC(O2)Oc(c3=O)coc(c34)cccc4

Level: 2

Mol. Weight: 786.69 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 786.69 g/mol

Structure

SMILES: O1CCCCC1COC(OC2)CCC2OC3CCCCO3

Level: 2

Mol. Weight: 786.69 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 786.69 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 786.69 g/mol

Structure

SMILES: O1CCCCC1COC2CCCCO2

Level: 1

Mol. Weight: 786.69 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 786.69 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 786.69 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 786.69 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 786.69 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.61
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
12.91
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
2544.36

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.71
Plasma Protein Binding
29.14
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
7.94
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-58.47
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.71
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
7.43
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-4613177.91
Rat (Acute)
2.35
Rat (Chronic Oral)
4.88
Fathead Minnow
5831.43
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
511909.02
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-1.51
Log(P)
-1.46
Log S
-4.66
Log(Vapor Pressure)
-16811.61
Melting Point
227.12
pKa Acid
-87.08
pKa Basic
6.57
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.9055
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.9055
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8860
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8860
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8809
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8809
Botulinum neurotoxin type A P0DPI0 BXA1_CLOBO Clostridium botulinum 3 0.8649
Botulinum neurotoxin type A P0DPI0 BXA1_CLOBO Clostridium botulinum 3 0.8649
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8368
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8368
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8216
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8216
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8088
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8088
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.8065
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.8065
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.8043
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.8043
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8030
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8030
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 4 0.7967
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7967
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 4 0.7967
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7967
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7955
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7955
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7850
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7850
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7850
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7850
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7828
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7828
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7762
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7762
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7744
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7744
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7736
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7736
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7735
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7735
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7681
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7681
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7656
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.7656
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.7448
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.7448
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7386
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7386
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 4 0.7335
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 4 0.7335
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7319
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7319
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7184
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7184
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7167
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7167
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7128
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7128
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7107
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 4 0.7107
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7079
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7079
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.7074
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.7074
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7008
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.7008

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