Kaempferol-3-O-alpha-L-rhamnopyranosyl-(1→6)-]-beta-D-glucopyranoside - Compound Card

Kaempferol-3-O-alpha-L-rhamnopyranosyl-(1→6)-]-beta-D-glucopyranoside

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Kaempferol-3-O-alpha-L-rhamnopyranosyl-(1→6)-]-beta-D-glucopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Oleaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonol Glycoside
Canonical Smiles OC[C@H]1OC(O[C@@H]2O[C@@H](Oc3c(oc4c(c3=O)c(O)cc(c4)O)c3ccc(cc3)O)[C@@H]([C@@H]([C@H]2O)O)O)[C@@H]([C@H]([C@@H]1O)O)O
InChI InChI=1S/C26H28O16/c27-7-13-15(31)17(33)19(35)24(39-13)41-26-21(37)18(34)20(36)25(42-26)40-23-16(32)14-11(30)5-10(29)6-12(14)38-22(23)8-1-3-9(28)4-2-8/h1-6,13,15,17-21,24-31,33-37H,7H2/t13-,15-,17+,18+,19-,20-,21-,24?,25-,26-/m1/s1
InChIKey KPOVALBVCPBMHU-MQQQLUACSA-N
Formula C26H28O16
HBA 16
HBD 10
MW 596.49
Rotatable Bonds 6
TPSA 269.43
LogP -2.46
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 42
Formal Charge 0
Fraction CSP3 0.42
Exact Mass 596.14
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Fraxinus oxycarba Oleaceae Plantae 38871

Showing of synonyms

  • Hosny M (1998). Secoiridoid glucosides from Fraxinus oxycarba. Phytochemistry,1998,47(8),1569-1576. [View]
Pubchem: 162817141

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCC(O4)OC5CCCCO5

Level: 3

Mol. Weight: 596.49 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCC(O3)OC4CCCCO4

Level: 2

Mol. Weight: 596.49 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 596.49 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 596.49 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 596.49 g/mol

Structure

SMILES: O1CCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 596.49 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 596.49 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 596.49 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 596.49 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.47
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.59
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
7.86

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.75
Plasma Protein Binding
62.8
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
8.26
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-3.63
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.95
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.15
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-9342.67
Rat (Acute)
2.31
Rat (Chronic Oral)
4.21
Fathead Minnow
19.12
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
533.26
Hydration Free Energy
-2.94
Log(D) at pH=7.4
-0.91
Log(P)
-0.29
Log S
-4.45
Log(Vapor Pressure)
-12.09
Melting Point
213.14
pKa Acid
3.27
pKa Basic
8.65
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.9336
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.9336
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.8961
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.8961
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8936
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8936
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8893
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8893
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.8760
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.8760
Tyrosine-protein kinase JAK3 P52333 JAK3_HUMAN Homo sapiens 3 0.8707
Tyrosine-protein kinase JAK3 P52333 JAK3_HUMAN Homo sapiens 3 0.8707
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.8584
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 4 0.8584
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8498
D-aminoacyl-tRNA deacylase Q8IIS0 DTD_PLAF7 Plasmodium falciparum 3 0.8498
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.8390
Proto-oncogene tyrosine-protein kinase Src P00523 SRC_CHICK Gallus gallus 3 0.8390
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8355
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.8355
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8315
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8315
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.8296
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.8296
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8267
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.8267
Cyclic dipeptide N-prenyltransferase D1D8L6 D1D8L6_ASPFM Neosartorya fumigata 3 0.8239
Cyclic dipeptide N-prenyltransferase D1D8L6 D1D8L6_ASPFM Neosartorya fumigata 3 0.8239
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8091
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.8091
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8040
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8040
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.8026
Streptogramin A acetyltransferase P50870 VATD_ENTFC Enterococcus faecium 3 0.8026
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7896
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 5 0.7896
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7892
Major pollen allergen Bet v 1-A P15494 BEV1A_BETPN Betula pendula 3 0.7892
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7783
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7783
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7713
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7713
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7708
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7708
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7638
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7638
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7618
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.7618
Biflaviolin synthase CYP158A1 Q9KZF5 C1581_STRCO Streptomyces coelicolor / M145) 3 0.7597
Biflaviolin synthase CYP158A1 Q9KZF5 C1581_STRCO Streptomyces coelicolor / M145) 3 0.7597
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7575
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7575
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7533
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7533
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7483
Lactotransferrin P24627 TRFL_BOVIN Bos taurus 2 0.7483
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.7472
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.7472
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase P62617 ISPF_ECOLI Escherichia coli 3 0.7455
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase P62617 ISPF_ECOLI Escherichia coli 3 0.7455
Botulinum neurotoxin type A P0DPI0 BXA1_CLOBO Clostridium botulinum 3 0.7453
Botulinum neurotoxin type A P0DPI0 BXA1_CLOBO Clostridium botulinum 3 0.7453
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.7437
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.7437
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.7396
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.7396
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7391
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7391
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 2 0.7320
Protein ppBat Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron VPI-5482 2 0.7320
O-methyltransferase family 2 D5STZ7 D5STZ7_PLAL2 Planctopirus limnophila 4 0.7253
O-methyltransferase family 2 D5STZ7 D5STZ7_PLAL2 Planctopirus limnophila 4 0.7253
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7243
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7243
17beta-hydroxysteroid dehydrogenase O93874 O93874_COCLU Cochliobolus lunatus 3 0.7233
17beta-hydroxysteroid dehydrogenase O93874 O93874_COCLU Cochliobolus lunatus 3 0.7233
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 4 0.7230
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 4 0.7230
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7227
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7227
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7200
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7200
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.7181
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 3 0.7181
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7173
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7173
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7169
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 3 0.7169
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7129
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7129
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 5 0.7114
Death-associated protein kinase 1 P53355 DAPK1_HUMAN Homo sapiens 5 0.7114
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7110
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7110
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7096
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.7096
Ribosomal protein S6 kinase alpha-3 P18654 KS6A3_MOUSE Mus musculus 6 0.7093
Ribosomal protein S6 kinase alpha-3 P18654 KS6A3_MOUSE Mus musculus 6 0.7093
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7079
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7079
FMN-dependent NAD(P)H:quinone oxidoreductase 1 Q9I5F3 AZOR1_PSEAE Pseudomonas aeruginosa 2 0.7078
FMN-dependent NAD(P)H:quinone oxidoreductase 1 Q9I5F3 AZOR1_PSEAE Pseudomonas aeruginosa 2 0.7078
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7041
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7041
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7012
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7012
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7008
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7008
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7005
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7005

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