Phyllagallin D1 - Compound Card

Phyllagallin D1

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Phyllagallin D1

Structure
Zoomed Structure
  • Family: Plantae - Tamaricaceae
  • Kingdom: Plantae
  • Class: Tannin
    • Subclass: Gallo-Ellagitannin
Canonical Smiles OCC1OC(OC(=O)c2cc(O)c(c(c2)O)O)C(C(C1O)OC(=O)c1cc(O)c(c(c1)O)O)OC(=O)c1cc(O)c(c(c1Oc1ccc(c(c1O)O)C(=O)O[C@@H]1OC2COC(=O)c3cc(O)c(c(c3c3c(C(=O)O[C@H]2C([C@@H]1O)OC(=O)c1cc(O)c(c(c1)O)O)cc(O)c(c3O)O)O)O)O)O
InChI InChI=1S/C61H48O40/c62-12-31-43(80)50(97-53(85)14-3-21(63)36(73)22(64)4-14)52(61(94-31)100-55(87)16-7-25(67)38(75)26(68)8-16)99-59(91)20-11-29(71)41(78)46(83)48(20)93-30-2-1-17(35(72)42(30)79)57(89)101-60-47(84)51(98-54(86)15-5-23(65)37(74)24(66)6-15)49-32(95-60)13-92-56(88)18-9-27(69)39(76)44(81)33(18)34-19(58(90)96-49)10-28(70)40(77)45(34)82/h1-11,31-32,43,47,49-52,60-84H,12-13H2/t31?,32?,43?,47-,49+,50?,51?,52?,60-,61?/m0/s1
InChIKey NGHWODXSXVAIMI-QEYUNHRVSA-N
Formula C61H48O40
HBA 40
HBD 23
MW 1421.02
Rotatable Bonds 13
TPSA 677.08
LogP 0.81
Number Rings 10
Number Aromatic Rings 7
Heavy Atom Count 101
Formal Charge 0
Fraction CSP3 0.2
Exact Mass 1420.17
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Tamarix aphylla Tamaricaceae Plantae 189786

Showing of synonyms

  • Orabi MA, Yoshimura M, et al. (2015). Ellagitannins, gallotannins, and gallo-ellagitannins from the galls of Tamarix aphylla. Fitoterapia,2015,104,55-63. [View] [PubMed]
Pubchem: 162836206
Nmrshiftdb2: 70060293

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C(=O)OC2OCCC(OC(=O)c3ccccc3)C2OC(=O)c4c(cccc4)Oc(cc5)ccc5C(=O)OC(O6)CC(OC(=O)c7ccccc7)C(OC(=O)c8cccc9)C6COC(=O)c(c1c89)cccc1

Level: 6

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2OCCC(OC(=O)c3ccccc3)C2OC(=O)c4c(cccc4)Oc(cc5)ccc5C(=O)OC(O6)CCC(OC(=O)c7cccc8)C6COC(=O)c(c9c78)cccc9

Level: 5

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2C(COCC2)OC(=O)c3c(cccc3)Oc(cc4)ccc4C(=O)OC(O5)CC(OC(=O)c6ccccc6)C(OC(=O)c7cccc8)C5COC(=O)c(c9c78)cccc9

Level: 5

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(OCCC2)C2OC(=O)c3c(cccc3)Oc(cc4)ccc4C(=O)OC(O5)CC(OC(=O)c6ccccc6)C(OC(=O)c7cccc8)C5COC(=O)c(c9c78)cccc9

Level: 5

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2C(COCC2)OC(=O)c3c(cccc3)Oc(cc4)ccc4C(=O)OC(O5)CCC(OC(=O)c6cccc7)C5COC(=O)c(c8c67)cccc8

Level: 4

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(OCCC2)C2OC(=O)c3c(cccc3)Oc(cc4)ccc4C(=O)OC(O5)CCC(OC(=O)c6cccc7)C5COC(=O)c(c8c67)cccc8

Level: 4

Mol. Weight: 1421.02 g/mol

Structure

SMILES: C1OCCCC1OC(=O)c2c(cccc2)Oc(cc3)ccc3C(=O)OC(O4)CC(OC(=O)c5ccccc5)C(OC(=O)c6cccc7)C4COC(=O)c(c8c67)cccc8

Level: 4

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1Oc(cccc2)c2C(=O)OC3C(OC(=O)c4ccccc4)CCOC3OC(=O)c5ccccc5

Level: 4

Mol. Weight: 1421.02 g/mol

Structure

SMILES: C1OCCCC1OC(=O)c2c(cccc2)Oc(cc3)ccc3C(=O)OC(O4)CCC(OC(=O)c5cccc6)C4COC(=O)c(c7c56)cccc7

Level: 3

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1cccc(c1c23)C(=O)OCC4C(OC(=O)c2cccc3)C(OC(=O)c5ccccc5)CC(O4)OC(=O)c6ccc(cc6)Oc7ccccc7

Level: 3

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2C(OC(=O)c3ccccc3)CCOC2OC(=O)c4ccccc4

Level: 3

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1Oc(cccc2)c2C(=O)OC3C(OCCC3)OC(=O)c4ccccc4

Level: 3

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1Oc(cccc2)c2C(=O)OC(COCC3)C3OC(=O)c4ccccc4

Level: 3

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(O2)CC(OC(=O)c3ccccc3)C(OC(=O)c4cccc5)C2COC(=O)c(c6c45)cccc6

Level: 2

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1Oc(cc2)ccc2C(=O)OC(O3)CCC(OC(=O)c4cccc5)C3COC(=O)c(c6c45)cccc6

Level: 2

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2CC(OCC2)OC(=O)c3ccccc3

Level: 2

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2C(OCCC2)OC(=O)c3ccccc3

Level: 2

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2C(COCC2)OC(=O)c3ccccc3

Level: 2

Mol. Weight: 1421.02 g/mol

Structure

SMILES: C1OCCCC1OC(=O)c2c(cccc2)Oc3ccccc3

Level: 2

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(O2)CCC(OC(=O)c3cccc4)C2COC(=O)c(c5c34)cccc5

Level: 1

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(CCO2)C(OC(=O)c3cccc4)C2COC(=O)c(c5c34)cccc5

Level: 1

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2CCOCC2

Level: 1

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2CCCOC2

Level: 1

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1C(=O)OC2CCCCO2

Level: 1

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1Oc2ccccc2

Level: 1

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1cccc(c1c23)C(=O)OCC4C(CCCO4)OC(=O)c2cccc3

Level: 0

Mol. Weight: 1421.02 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 1421.02 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 1421.02 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.04
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
8917859052113358.0
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
1165459851177859000

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
-0.11
Plasma Protein Binding
-6.52
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
10.46
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-27105950763093650
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-11067685936.83
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2115253439488788800000
Rat (Acute)
1705775.72
Rat (Chronic Oral)
4537033168135.86
Fathead Minnow
2670057527367100400
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
237907348551890400000
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-132252768373046.2
Log(P)
-15395782244.0
Log S
-9.24
Log(Vapor Pressure)
-7834170057241185000
Melting Point
-2380522986007.91
pKa Acid
-57084272706890390
pKa Basic
-459241296278575.8
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.9245
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.9245
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8790
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8790
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.8629
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.8629
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8530
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8530
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8290
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.8290
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8260
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8260
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 4 0.8237
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 4 0.8237
NAD(P)H-hydrate epimerase Q8K4Z3 NNRE_MOUSE Mus musculus 3 0.8173
NAD(P)H-hydrate epimerase Q8K4Z3 NNRE_MOUSE Mus musculus 3 0.8173
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8167
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8167
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8090
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8090
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8057
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8057
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7914
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7914
Polymerase acidic protein Q5EP34 Q5EP34_9INFA Influenza A virus 3 0.7718
Polymerase acidic protein Q5EP34 Q5EP34_9INFA Influenza A virus 3 0.7718
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7684
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7684
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7605
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7605
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7593
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7593
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7552
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7552
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7547
Avidin P02701 AVID_CHICK Gallus gallus 3 0.7547
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7526
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7526
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7520
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 3 0.7520
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.7447
Protease O38896 O38896_9HIV1 Human immunodeficiency virus 1 3 0.7447
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7410
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7410
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.7344
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.7344
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7337
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7337
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7337
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7337
Tannase B3Y018 B3Y018_LACPN Lactiplantibacillus plantarum 4 0.7314
Tannase B3Y018 B3Y018_LACPN Lactiplantibacillus plantarum 4 0.7314
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7283
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7283
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7151
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7151
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.7103
Homoserine dehydrogenase P31116 DHOM_YEAST Saccharomyces cerevisiae 4 0.7103
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7089
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7089
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7078
Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic Q43088 RBCMT_PEA Pisum sativum 3 0.7078
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7057
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7057
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7032
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7032

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