Phyllagallin D3 - Compound Card

Phyllagallin D3

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Phyllagallin D3

Structure
Zoomed Structure
  • Family: Plantae - Tamaricaceae
  • Kingdom: Plantae
  • Class: Tannin
    • Subclass: Gallotannin
Canonical Smiles OCC1OC2OC(=O)c3cc(O)c(c(c3)Oc3c(cc(c(c3O)O)O)C(=O)OC3C(OC(=O)c4cc(c(Oc5c(C(=O)OC2C(C1O)OC(=O)c1cc(O)c(c(c1)O)O)cc(O)c(c5O)O)c(O)c4)O)OC(C(C3OC(=O)c1cc(O)c(c(c1)O)O)O)CO)O
InChI InChI=1S/C54H44O36/c55-11-29-36(71)43(85-47(75)13-1-19(57)31(66)20(58)2-13)45-53(82-29)89-49(77)15-6-26(64)42(27(65)7-15)84-41-18(10-25(63)35(70)39(41)74)52(80)88-46-44(86-48(76)14-3-21(59)32(67)22(60)4-14)37(72)30(12-56)83-54(46)90-50(78)16-5-23(61)33(68)28(8-16)81-40-17(51(79)87-45)9-24(62)34(69)38(40)73/h1-10,29-30,36-37,43-46,53-74H,11-12H2
InChIKey SXQVTNLHIMAHLZ-UHFFFAOYSA-N
Formula C54H44O36
HBA 36
HBD 20
MW 1268.91
Rotatable Bonds 6
TPSA 599.32
LogP 0.25
Number Rings 10
Number Aromatic Rings 6
Heavy Atom Count 90
Formal Charge 0
Fraction CSP3 0.22
Exact Mass 1268.16
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Tamarix aphylla Tamaricaceae Plantae 189786

Showing of synonyms

  • Orabi MA, Yoshimura M, et al. (2015). Ellagitannins, gallotannins, and gallo-ellagitannins from the galls of Tamarix aphylla. Fitoterapia,2015,104,55-63. [View] [PubMed]
Pubchem: 162823071
Nmrshiftdb2: 70060300

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)Oc3cc(ccc3)C(=O)OC4C(C(CCO4)OC(=O)c5ccccc5)OC(=O)c6c(cccc6)Oc7ccc(cc7)C(=O)OC8C(OC2=O)C(CCO8)OC(=O)c9ccccc9

Level: 2

Mol. Weight: 1268.91 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(CCO2)C(OC3=O)C2OC(=O)c(ccc4)cc4Oc(cccc5)c5C(=O)OC(CCCO6)C6OC(=O)c(cc7)ccc7Oc(c38)cccc8

Level: 1

Mol. Weight: 1268.91 g/mol

Structure

SMILES: c1ccccc1C(=O)OC(CCO2)C(OC3=O)C2OC(=O)c(cc4)ccc4Oc(cccc5)c5C(=O)OC(CCCO6)C6OC(=O)c(ccc7)cc7Oc(c38)cccc8

Level: 1

Mol. Weight: 1268.91 g/mol

Structure

SMILES: c1cccc(c12)Oc3cc(ccc3)C(=O)OC4C(CCCO4)OC(=O)c5c(cccc5)Oc6ccc(cc6)C(=O)OC7C(OC2=O)CCCO7

Level: 0

Mol. Weight: 1268.91 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 1268.91 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.33
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
24890208575.7
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
3252859346904.06

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.13
Plasma Protein Binding
-12.15
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
10.15
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-75654142323.6
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-30891.25
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-5903782500290081.0
Rat (Acute)
2.72
Rat (Chronic Oral)
12663093.72
Fathead Minnow
7452268393912.28
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
664011880272587.4
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-369124336.78
Log(P)
-42969.87
Log S
-8.31
Log(Vapor Pressure)
-21865578384822.08
Melting Point
-6639553.97
pKa Acid
-159325204899.75
pKa Basic
-1281766563.15
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.8563
rRNA N-glycosylase D9J2T9 D9J2T9_MOMBA Momordica balsamina 3 0.8563
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8540
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.8540
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8518
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8518
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8374
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8374
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.8283
MAP kinase-activated protein kinase 2 P49137 MAPK2_HUMAN Homo sapiens 3 0.8283
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.8233
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.8233
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8225
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8225
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8119
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8119
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7864
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7864
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7780
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.7780
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7367
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7367
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.7322
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.7322
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 5 0.7226
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 5 0.7226
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7144
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7144
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7136
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7136
Basic phospholipase A2 homolog piratoxin-1 P58399 PA2H1_BOTPI Bothrops pirajai 4 0.7120
Basic phospholipase A2 homolog piratoxin-1 P58399 PA2H1_BOTPI Bothrops pirajai 4 0.7120
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 5 0.7118
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 5 0.7118
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 4 0.7086
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 4 0.7086
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7073
Protein mono-ADP-ribosyltransferase PARP3 Q9Y6F1 PARP3_HUMAN Homo sapiens 3 0.7073
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7024
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7024

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