Nilotinin D9 - Compound Card

Nilotinin D9

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Nilotinin D9

Structure
Zoomed Structure
  • Family: Plantae - Tamaricaceae
  • Kingdom: Plantae
  • Class: Tannin
    • Subclass: Hellinoyl-Type Ellagitannin
Canonical Smiles OCC1O[C@H]2OC(=O)c3cc(O)c(c(c3)O)Oc3c(cc(c(c3O)O)O)C(=O)O[C@H]3[C@H](OC(=O)c4cc(Oc5c(C(=O)OC2[C@H]([C@@H]1O)OC(=O)c1cc(O)c(c(c1)O)O)cc(O)c(c5O)O)c(O)c(c4)O)CC1C(C3OC(=O)c2cc(O)c(c(c2)O)O)OC(=O)c2cc(O)c(c(c2c2c(C(=O)OC1)cc(c(c2O)O)O)O)O
InChI InChI=1S/C69H52O43/c70-14-38-48(89)58(109-62(95)16-1-25(71)41(82)26(72)2-16)60-69(105-38)112-64(97)18-6-34(80)56(35(81)7-18)106-55-24(13-33(79)47(88)52(55)93)67(100)108-57-37(104-61(94)19-5-29(75)43(84)36(8-19)103-54-23(68(101)111-60)12-32(78)46(87)51(54)92)9-20-15-102-65(98)21-10-30(76)44(85)49(90)39(21)40-22(11-31(77)45(86)50(40)91)66(99)107-53(20)59(57)110-63(96)17-3-27(73)42(83)28(74)4-17/h1-8,10-13,20,37-38,48,53,57-60,69-93H,9,14-15H2/t20?,37-,38?,48-,53?,57+,58+,59?,60?,69+/m1/s1
InChIKey NUTSSYJZHXXQMO-CHJBIBAFSA-N
Formula C69H52O43
HBA 43
HBD 24
MW 1569.13
Rotatable Bonds 5
TPSA 723.61
LogP 2.85
Number Rings 13
Number Aromatic Rings 8
Heavy Atom Count 112
Formal Charge 0
Fraction CSP3 0.19
Exact Mass 1568.19
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Tamarix nilotica Tamaricaceae Plantae 189799

Showing of synonyms

  • Orabi MA, Taniguchi S, et al. (2010). Hydrolyzable tannins of tamaricaceous plants. III. Hellinoyl- and macrocyclic-type ellagitannins from Tamarix nilotica. Journal of Natural Products,2010,73(5),870-879. [View] [PubMed]
Pubchem: 162817061

No compound-protein relationship available.

Structure

SMILES: c1cccc(c1c23)C(=O)OCC4C(OC(=O)c2cccc3)C(OC(=O)c5ccccc5)C6C(C4)OC(=O)c7cc(ccc7)Oc8c(cccc8)C(=O)OC9C(OCCC9OC(=O)c1ccccc1)OC(=O)c1ccc(cc1)Oc1c(C(=O)O6)cccc1

Level: 2

Mol. Weight: 1569.13 g/mol

Structure

SMILES: c1cccc(c1c23)C(=O)OCC4C(OC(=O)c2cccc3)C(OC(=O)c5ccccc5)C6C(C4)OC(=O)c7cc(ccc7)Oc8c(cccc8)C(=O)OC9C(OCCC9)OC(=O)c1ccc(cc1)Oc1c(C(=O)O6)cccc1

Level: 1

Mol. Weight: 1569.13 g/mol

Structure

SMILES: c1cccc(C(=O)O2)c1Oc(cc3)ccc3C(=O)OC(OCCC4OC(=O)c5ccccc5)C4OC(=O)c(cccc6)c6Oc(ccc7)cc7C(=O)OC(C8)C2CC(OC(=O)c9cccc1)C8COC(=O)c(c2c19)cccc2

Level: 1

Mol. Weight: 1569.13 g/mol

Structure

SMILES: c1cccc(c1c23)C(=O)OCC4C(OC(=O)c2cccc3)CC5C(C4)OC(=O)c6cc(ccc6)Oc7c(cccc7)C(=O)OC8C(OCCC8)OC(=O)c9ccc(cc9)Oc1c(C(=O)O5)cccc1

Level: 0

Mol. Weight: 1569.13 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 1569.13 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.04
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
1432754836621177700000
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
187244297153970480000000

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
-0.04
Plasma Protein Binding
-3.43
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
9.83
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-4354878939349344000000
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-1778148087750633.2
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
4.05
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-339839385383262160000000000
Rat (Acute)
274066403874.82
Rat (Chronic Oral)
728925796930567600
Fathead Minnow
428975171041792500000000
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Toxic

General Properties

Boiling Point
38222508208268487000000000
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-21247902682160000000
Log(P)
-2473506193507400.5
Log S
-10.26
Log(Vapor Pressure)
-1258647653651639800000000
Melting Point
-382457949157707200
pKa Acid
-9171235642437232000000
pKa Basic
-73782299132945230000
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8522
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.8522
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8350
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 4 0.8350
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8095
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.8095
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8061
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.8061
Polymerase acidic protein Q5EP34 Q5EP34_9INFA Influenza A virus 3 0.7612
Polymerase acidic protein Q5EP34 Q5EP34_9INFA Influenza A virus 3 0.7612
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7531
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7531
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.7474
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 4 0.7474
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7364
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 4 0.7364
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7263
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7263
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 4 0.7169
Thymidylate synthase P0A884 TYSY_ECOLI Escherichia coli 4 0.7169
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7156
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 3 0.7156
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7085
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7085
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7052
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7052
Cyclic GMP-AMP phosphodiesterase SMPDL3A Q92484 ASM3A_HUMAN Homo sapiens 2 0.7001
Cyclic GMP-AMP phosphodiesterase SMPDL3A Q92484 ASM3A_HUMAN Homo sapiens 2 0.7001

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