Pentandroside F - Compound Card

Pentandroside F

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Pentandroside F

Structure
Zoomed Structure
  • Family: Plantae - Zygophyllaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Steroidal Glycoside
Canonical Smiles OC[C@H]1O[C@@H](O[C@@H]2C=C3CC[C@@H]4[C@@H]([C@]3(C[C@H]2O)C)CC[C@]2([C@H]4CC[C@@H]2[C@@H](C(CC[C@@H](CO[C@@H]2O[C@H](CO)[C@H]([C@@H]([C@H]2O)O)O)C)O)C)C)[C@@H]([C@H]([C@H]1O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O)O)O
InChI InChI=1S/C57H96O29/c1-21(20-77-51-44(73)40(69)36(65)31(15-58)79-51)5-10-28(63)22(2)25-8-9-26-24-7-6-23-13-30(29(64)14-57(23,4)27(24)11-12-56(25,26)3)78-52-47(76)43(72)48(35(19-62)83-52)84-55-50(86-54-46(75)42(71)38(67)33(17-60)81-54)49(39(68)34(18-61)82-55)85-53-45(74)41(70)37(66)32(16-59)80-53/h13,21-22,24-55,58-76H,5-12,14-20H2,1-4H3/t21-,22-,24-,25+,26-,27-,28?,29+,30+,31+,32+,33+,34+,35+,36+,37+,38+,39+,40-,41-,42-,43+,44+,45+,46+,47+,48-,49-,50+,51+,52+,53-,54-,55-,56+,57-/m0/s1
InChIKey VLYIKJYIZXEYKF-RAYMYPRPSA-N
Formula C57H96O29
HBA 29
HBD 19
MW 1245.37
Rotatable Bonds 21
TPSA 476.67
LogP -6.58
Number Rings 9
Number Aromatic Rings 0
Heavy Atom Count 86
Formal Charge 0
Fraction CSP3 0.96
Exact Mass 1244.6
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Tribulus species Tribulaceae Plantae 43873
2 Tribulus pentandrus Zygophyllaceae Plantae 1965241

Showing of synonyms

  • Hamed AI, Janda B, et al. (2012). Profiles of steroidal saponins from the aerial parts of Tribulus pentandrus, T. megistopterus subsp. pterocarpus and T. parvispinus by LC-ESI-MS/MS. Phytochemical Analysis,2012,23(6),613-621. [View] [PubMed]
  • Hamed AI, Oleszek W, et al. (2004). Steroidal saponins from the aerial parts of Tribulus pentandrus Forssk. Phytochemistry,2004,65(21),2935-45. [View] [PubMed]
Pubchem: 101361935
Nmrshiftdb2: 70036542

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OCCCCCCC(CC2)C(C23)CCC4C3CCC=5C4CCC(C5)OC(OC6)CCC6OC7OCCC(OC8CCCCO8)C7OC9CCCCO9

Level: 5

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OCCCCCCC(CC2)C(C23)CCC4C3CCC=5C4CCC(C5)OC(OC6)CCC6OC(OCCC7)C7OC8CCCCO8

Level: 4

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OCCCCCCC(CC2)C(C23)CCC4C3CCC=5C4CCC(C5)OC(OC6)CCC6OC(OCC7)CC7OC8CCCCO8

Level: 4

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC=4C3CCC(C4)OC(OC5)CCC5OC6OCCC(OC7CCCCO7)C6OC8CCCCO8

Level: 4

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OCCCCCCC(CC2)C(C23)CCC4C3CCC=5C4CCC(C5)OC(OC6)CCC6OC7CCCCO7

Level: 3

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC=4C3CCC(C4)OC(OC5)CCC5OC(OCCC6)C6OC7CCCCO7

Level: 3

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC=4C3CCC(C4)OC(OC5)CCC5OC(OCC6)CC6OC7CCCCO7

Level: 3

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OC2C(OC3CCCCO3)CCOC2OC4CCCOC4

Level: 3

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OCCCCCCC(CC2)C(C23)CCC4C3CCC=5C4CCC(C5)OC6CCCCO6

Level: 2

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC=4C3CCC(C4)OC(OC5)CCC5OC6CCCCO6

Level: 2

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OC2CC(OCC2)OC3CCCOC3

Level: 2

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OC2C(OCCC2)OC3CCCOC3

Level: 2

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OC2C(COCC2)OC3CCCCO3

Level: 2

Mol. Weight: 1245.37 g/mol

Structure

SMILES: O1CCCCC1OCCCCCCC2CCC(C23)C4C(CC3)C5C(CC4)=CCCC5

Level: 1

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC=4C3CCC(C4)OC5CCCCO5

Level: 1

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1COCCC1OC2CCCCO2

Level: 1

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CCC=4C3CCCC4

Level: 0

Mol. Weight: 1245.37 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 1245.37 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.65
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
7523114796.350
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
983182450618.78

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.570
Plasma Protein Binding
47.27
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
1.860
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Safe
Bioconcentration Factor
-22866595425.840
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-9336.670
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
4.050
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Toxic
NR-ER-LBD
Toxic
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1784428765542507.000
Rat (Acute)
4.210
Rat (Chronic Oral)
3827442.720
Fathead Minnow
2252461069420.200
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
200698744738532.625
Hydration Free Energy
-2.920
Log(D) at pH=7.4
-111568495.990
Log(P)
-12990.22
Log S
-1.38
Log(Vapor Pressure)
-6608909440793.46
Melting Point
-2005122.96
pKa Acid
-48156331946.96
pKa Basic
-387416134.28
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.9181
11-beta-hydroxysteroid dehydrogenase 1 P28845 DHI1_HUMAN Homo sapiens 3 0.9181

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