Elemicin - Compound Card

Elemicin

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Elemicin

Structure
Zoomed Structure
  • Family: Plantae - Asteraceae
  • Kingdom: Plantae
  • Class: Monoaromatic
    • Subclass: Phenylpropene
Canonical Smiles C=CCc1cc(OC)c(c(c1)OC)OC
InChI InChI=1S/C12H16O3/c1-5-6-9-7-10(13-2)12(15-4)11(8-9)14-3/h5,7-8H,1,6H2,2-4H3
InChIKey BPLQKQKXWHCZSS-UHFFFAOYSA-N
Formula C12H16O3
HBA 3
HBD 0
MW 208.26
Rotatable Bonds 5
TPSA 27.69
LogP 2.44
Number Rings 1
Number Aromatic Rings 1
Heavy Atom Count 15
Formal Charge 0
Fraction CSP3 0.33
Exact Mass 208.11
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Daucus glaber Apiaceae Plantae 4038
2 Daucus carota subsp. carota Apiaceae Plantae
3 Conyza steudellii Asteraceae Plantae 41552

Showing of synonyms

  • Ahmed AA. (1991). A diterpene xyloside from Conyza steudellii. Phytochemistry,1991,30(2),611-612. [View] [PubMed]
  • Mansour ESS, Maatooq GT, et al. (2004). Essential oil of Daucus glaber Forssk. Zeitschrift für Naturforschung C,2004,59,373-378. [View] [PubMed]
  • Marzouki H, Khaldi A, et al. (2010). Essential oils of Daucus carota subsp. carota of Tunisia obtained by supercritical carbon dioxide extraction.. Natural Product Communications,2010,5(12),1955-1958. [View] [PubMed]
Pubchem: 10248
Kegg Ligand: C10451
Chebi: 4771
Nmrshiftdb2: 60019712
CPRiL: 108690
Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 208.26 g/mol

Antimicrobial

Absorption

Caco-2 (logPapp)
-4.3
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-3.74
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.94

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.73
Plasma Protein Binding
12.57
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.66
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.86
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Toxic
Eye Irritation
Toxic
Maximum Tolerated Dose
1.14
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
6.88
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
3.31
Rat (Acute)
2.17
Rat (Chronic Oral)
1.9
Fathead Minnow
4.3
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
279.77
Hydration Free Energy
-5.38
Log(D) at pH=7.4
2.1
Log(P)
2.63
Log S
-2.11
Log(Vapor Pressure)
-2.4
Melting Point
10.71
pKa Acid
9.71
pKa Basic
2.83
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.9767
Toxoflavin degrading enzyme E3SET7 E3SET7_PAEPO Paenibacillus polymyxa 3 0.9767
Trichothecene 15-O-acetyltransferase TRI3 Q9C1B7 TRI3_FUSSP Fusarium sporotrichioides 3 0.9549
Trichothecene 15-O-acetyltransferase TRI3 Q9C1B7 TRI3_FUSSP Fusarium sporotrichioides 3 0.9549
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.9461
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.9461
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.8114
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.8114
O-GlcNAcase NagJ Q0TR53 OGA_CLOP1 Clostridium perfringens 3 0.7959
O-GlcNAcase NagJ Q0TR53 OGA_CLOP1 Clostridium perfringens 3 0.7959
Uridine phosphorylase P12758 UDP_ECOLI Escherichia coli 3 0.7926
Uridine phosphorylase P12758 UDP_ECOLI Escherichia coli 3 0.7926
Uridine phosphorylase P0A1F6 UDP_SALTY Salmonella typhimurium 3 0.7839
Uridine phosphorylase P0A1F6 UDP_SALTY Salmonella typhimurium 3 0.7839
LL-diaminopimelate aminotransferase, chloroplastic Q93ZN9 DAPAT_ARATH Arabidopsis thaliana 2 0.7648
LL-diaminopimelate aminotransferase, chloroplastic Q93ZN9 DAPAT_ARATH Arabidopsis thaliana 2 0.7648
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.7536
Ribosomal small subunit pseudouridine synthase A P0AA43 RSUA_ECOLI Escherichia coli 3 0.7536
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7455
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7455
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7396
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7396
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 2 0.7391
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 2 0.7391
ADP compounds hydrolase NudE P45799 NUDE_ECOLI Escherichia coli 2 0.7362
ADP compounds hydrolase NudE P45799 NUDE_ECOLI Escherichia coli 2 0.7362
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7351
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7351
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 2 0.7332
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 2 0.7332
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 2 0.7295
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 2 0.7295
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7265
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7265
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7259
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 2 0.7259
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7259
Purine nucleoside phosphorylase P00491 PNPH_HUMAN Homo sapiens 2 0.7259
L-methionine gamma-lyase P13254 MEGL_PSEPU Pseudomonas putida 3 0.7256
L-methionine gamma-lyase P13254 MEGL_PSEPU Pseudomonas putida 3 0.7256
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7234
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7234
Tyrosine-protein kinase JAK1 P23458 JAK1_HUMAN Homo sapiens 2 0.7232
Tyrosine-protein kinase JAK1 P23458 JAK1_HUMAN Homo sapiens 2 0.7232
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7219
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7219
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 2 0.7217
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 2 0.7217
5-aminolevulinate synthase P18079 HEM1_RHOCB Rhodobacter capsulatus 2 0.7185
5-aminolevulinate synthase P18079 HEM1_RHOCB Rhodobacter capsulatus 2 0.7185
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 2 0.7182
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 2 0.7182
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 2 0.7178
Hypoxanthine phosphoribosyltransferase Q4DRC4 Q4DRC4_TRYCC Trypanosoma cruzi 2 0.7178
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 3 0.7167
WxcM-like protein Q12KT8 Q12KT8_SHEDO Shewanella denitrificans 3 0.7167
Uracil-DNA glycosylase P20536 UNG_VACCC Vaccinia virus 3 0.7156
Uracil-DNA glycosylase P20536 UNG_VACCC Vaccinia virus 3 0.7156
Aspartate aminotransferase P00509 AAT_ECOLI Escherichia coli 2 0.7150
Aspartate aminotransferase P00509 AAT_ECOLI Escherichia coli 2 0.7150
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7124
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7124
Uridine phosphorylase Q5XA29 Q5XA29_STRP6 Streptococcus pyogenes serotype M6 3 0.7117
Uridine phosphorylase Q5XA29 Q5XA29_STRP6 Streptococcus pyogenes serotype M6 3 0.7117
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7116
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7116
Single-strand selective monofunctional uracil DNA glycosylase Q9YGN6 SMUG1_XENLA Xenopus laevis 3 0.7114
Single-strand selective monofunctional uracil DNA glycosylase Q9YGN6 SMUG1_XENLA Xenopus laevis 3 0.7114
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase P0AF12 MTNN_ECOLI Escherichia coli 2 0.7110
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase P0AF12 MTNN_ECOLI Escherichia coli 2 0.7110
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 2 0.7097
Norsolorinic acid synthase Q12053 AFLC_ASPPU Aspergillus parasiticus 2 0.7097
Uridine phosphorylase P0A1F6 UDP_SALTY Salmonella typhimurium 3 0.7070
Uridine phosphorylase P0A1F6 UDP_SALTY Salmonella typhimurium 3 0.7070
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7055
Capsid protein Q9WBP8 Q9WBP8_9VIRU Adeno-associated virus - 1 2 0.7055
TamL D3Y1I2 D3Y1I2_9ACTN Streptomyces sp. 307-9 2 0.7051
TamL D3Y1I2 D3Y1I2_9ACTN Streptomyces sp. 307-9 2 0.7051
Sulfotransferase 1A1 P50225 ST1A1_HUMAN Homo sapiens 2 0.7045
Sulfotransferase 1A1 P50225 ST1A1_HUMAN Homo sapiens 2 0.7045
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 2 0.7038
Uracil phosphoribosyltransferase Q26998 UPP_TOXGO Toxoplasma gondii 2 0.7038
DNA topoisomerase 1 P06612 TOP1_ECOLI Escherichia coli 3 0.7033
DNA topoisomerase 1 P06612 TOP1_ECOLI Escherichia coli 3 0.7033
Uridine phosphorylase Q9KT71 Q9KT71_VIBCH Vibrio cholerae serotype O1 3 0.7027
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7027
Uridine phosphorylase Q9KT71 Q9KT71_VIBCH Vibrio cholerae serotype O1 3 0.7027
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7027
Biotin carboxylase P43873 ACCC_HAEIN Haemophilus influenzae 2 0.7023
Biotin carboxylase P43873 ACCC_HAEIN Haemophilus influenzae 2 0.7023
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 2 0.7010
Fibroblast growth factor receptor 2 P21802 FGFR2_HUMAN Homo sapiens 2 0.7010
histidine kinase O32393 O32393_ARTPT Arthrospira platensis 2 0.7004
histidine kinase O32393 O32393_ARTPT Arthrospira platensis 2 0.7004

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