Inerminoside B - Compound Card

Inerminoside B

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Inerminoside B

Structure
Zoomed Structure
  • Family: Plantae - Verbenaceae
  • Kingdom: Plantae
  • Class: Glycoside
    • Subclass: Iridoid Glycoside
Canonical Smiles OC/C=C(/CC/C=C(/C(=O)OC[C@@]1(O)CO[C@H]([C@@H]1O)O[C@H]1[C@@H](O[C@@H]([C@H]([C@@H]1O)O)CO)O[C@@H]1OC=C([C@@H]2[C@@H]1[C@H](C)[C@H](C2)O)C(=O)O)\C)\C
InChI InChI=1S/C31H46O16/c1-14(7-8-32)5-4-6-15(2)27(40)43-12-31(41)13-44-30(25(31)37)46-24-23(36)22(35)20(10-33)45-29(24)47-28-21-16(3)19(34)9-17(21)18(11-42-28)26(38)39/h6-7,11,16-17,19-25,28-30,32-37,41H,4-5,8-10,12-13H2,1-3H3,(H,38,39)/b14-7+,15-6+/t16-,17-,19+,20-,21+,22-,23+,24-,25+,28+,29+,30+,31-/m1/s1
InChIKey RAAZLUVKRWKOPP-IXTFQXLOSA-N
Formula C31H46O16
HBA 15
HBD 8
MW 674.69
Rotatable Bonds 13
TPSA 251.36
LogP -1.56
Number Rings 4
Number Aromatic Rings 0
Heavy Atom Count 47
Formal Charge 0
Fraction CSP3 0.74
Exact Mass 674.28
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Clerodendrum inerme Verbenaceae Plantae 49994

Showing of synonyms

  • Calis I, Hosny M, et al. (1994). Inerminosides A and B, two novel complex iridoid glycosides from Clerodendrum inerme. Journal of Natural Products,1994,57(4),494-500. [View] [PubMed]
Pubchem: 102275330

No compound-protein relationship available.

Structure

SMILES: C1CCC(C12)C(OC=C2)OC(OCCC3)C3OC4CCCO4

Level: 2

Mol. Weight: 674.69 g/mol

Structure

SMILES: C1CCC(C12)C(OC=C2)OC3CCCCO3

Level: 1

Mol. Weight: 674.69 g/mol

Structure

SMILES: O1CCCC1OC2CCCOC2

Level: 1

Mol. Weight: 674.69 g/mol

Structure

SMILES: C1CCC(C12)COC=C2

Level: 0

Mol. Weight: 674.69 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 674.69 g/mol

Structure

SMILES: C1CCOC1

Level: 0

Mol. Weight: 674.69 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.27
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.16
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
43.25

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.96
Plasma Protein Binding
73.49
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.53
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-4.21
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.19
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.86
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-80370.54
Rat (Acute)
2.46
Rat (Chronic Oral)
3.84
Fathead Minnow
116.58
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
3805.03
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-0.81
Log(P)
-0.67
Log S
-1.87
Log(Vapor Pressure)
-133.26
Melting Point
149.84
pKa Acid
2.11
pKa Basic
4.82
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Xylose isomerase P24300 XYLA_STRRU Streptomyces rubiginosus 3 0.9177
Xylose isomerase P24300 XYLA_STRRU Streptomyces rubiginosus 3 0.9177
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.8387
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.8387
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.7661
Fatty acid-binding protein, liver P80226 FABPL_CHICK Gallus gallus 3 0.7661
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 3 0.7363
Streptavidin P22629 SAV_STRAV Streptomyces avidinii 3 0.7363
Chorismate mutase AroH P19080 AROH_BACSU Bacillus subtilis 2 0.7362
Chorismate mutase AroH P19080 AROH_BACSU Bacillus subtilis 2 0.7362
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7270
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7270
Carnitine O-acetyltransferase P47934 CACP_MOUSE Mus musculus 2 0.7175
Carnitine O-acetyltransferase P47934 CACP_MOUSE Mus musculus 2 0.7175

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