Xenibellal - Compound Card

Xenibellal

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Xenibellal

Structure
Zoomed Structure
  • Family: Animalia - Xeniidae
  • Kingdom: Animalia
  • Class: Terpenoid
    • Subclass: Norditerpenoid
Canonical Smiles O=C/C(=C\C=C\C(O)(C)C)/[C@H]1CC[C@]2(C)O[C@@H]2CC/C(=C\1)/C=O
InChI InChI=1S/C19H26O4/c1-18(2,22)9-4-5-16(13-21)15-8-10-19(3)17(23-19)7-6-14(11-15)12-20/h4-5,9,11-13,15,17,22H,6-8,10H2,1-3H3/b9-4+,14-11+,16-5+/t15-,17+,19-/m0/s1
InChIKey GKXYKSRLDXJJIP-FESQEPJASA-N
Formula C19H26O4
HBA 4
HBD 1
MW 318.41
Rotatable Bonds 5
TPSA 66.9
LogP 2.91
Number Rings 2
Number Aromatic Rings 0
Heavy Atom Count 23
Formal Charge 0
Fraction CSP3 0.58
Exact Mass 318.18
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Xenia umbellata Xeniidae Animalia 1366487

Showing of synonyms

  • El-Gamal AAH, Wang S-K, et al. (2005). Xenibellal, a novel norditerpenoid from the Formosan soft coral Xenia umbellate. Tetrahedron Letters,2005,46,4499-4450. [View]
Pubchem: 101738448
Nmrshiftdb2: 70081591

No compound-protein relationship available.

Structure

SMILES: C12C(O2)CCCC=CCC1

Level: 0

Mol. Weight: 318.41 g/mol

Cytotoxic

Absorption

Caco-2 (logPapp)
-4.67
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.260
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.34

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
-0.140
Plasma Protein Binding
27.22
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
10.840
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-0.080
Biodegradation
Toxic
Carcinogenesis
Toxic
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.330
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
7.090
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-0.390
Rat (Acute)
4.830
Rat (Chronic Oral)
1.300
Fathead Minnow
4.700
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
380.980
Hydration Free Energy
-7.540
Log(D) at pH=7.4
1.920
Log(P)
2.5
Log S
-3.18
Log(Vapor Pressure)
-5.35
Melting Point
85.0
pKa Acid
6.68
pKa Basic
4.07
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.9338
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.9338
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.9022
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 3 0.9022
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.7857
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 2 0.7857
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7453
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7453
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7405
Abscisic acid receptor PYL2 O80992 PYL2_ARATH Arabidopsis thaliana 2 0.7405
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7381
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 2 0.7381
Chitinase Q54276 Q54276_SERMA Serratia marcescens 3 0.7366
Chitinase Q54276 Q54276_SERMA Serratia marcescens 3 0.7366
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 2 0.7303
2-aminohexano-6-lactam racemase Q7M181 ACLR_ACHOB Achromobacter obae 2 0.7303
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 2 0.7227
Alpha-ketoglutarate-dependent dioxygenase FTO Q9C0B1 FTO_HUMAN Homo sapiens 2 0.7227
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7154
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7154
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 2 0.7150
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 2 0.7150
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7082
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7082

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