Gamma-eudesmol (2-xylopyranoside) - Compound Card

Gamma-eudesmol (2-xylopyranoside)

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Gamma-eudesmol (2-xylopyranoside)

Structure
Zoomed Structure
  • Family: Plantae - Asteraceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Sesquiterpene Glycoside
Canonical Smiles CC1=CCC[C@]2([C@H]1C[C@@H](CC2)C(O[C@@H]1OC[C@H]([C@@H]([C@H]1O)O)O)(C)C)C
InChI InChI=1S/C20H34O5/c1-12-6-5-8-20(4)9-7-13(10-14(12)20)19(2,3)25-18-17(23)16(22)15(21)11-24-18/h6,13-18,21-23H,5,7-11H2,1-4H3/t13-,14+,15-,16+,17-,18+,20-/m1/s1
InChIKey WCTJDTMLKUKOFI-HVNSQJPHSA-N
Formula C20H34O5
HBA 5
HBD 3
MW 354.49
Rotatable Bonds 3
TPSA 79.15
LogP 2.38
Number Rings 3
Number Aromatic Rings 0
Heavy Atom Count 25
Formal Charge 0
Fraction CSP3 0.9
Exact Mass 354.24
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Iphiona mucronata Asteraceae Plantae 2072397

Showing of synonyms

  • Ahmed AA (1990). Sesquiterpene xylosides from Iphiona mucronata. Journal of Natural Products,1990,53(4),1031-1033. [View]
Pubchem: 163009944
Nmrshiftdb2: 70060805

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OCC(C2)CCC(C23)CCC=C3

Level: 1

Mol. Weight: 354.49 g/mol

Structure

SMILES: C1=CCCC(C12)CCCC2

Level: 0

Mol. Weight: 354.49 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 354.49 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.85
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.64
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.43

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.77
Plasma Protein Binding
64.89
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.27
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.24
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.36
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
4.97
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-3.88
Rat (Acute)
2.64
Rat (Chronic Oral)
2.36
Fathead Minnow
3.66
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
392.39
Hydration Free Energy
-10.92
Log(D) at pH=7.4
2.96
Log(P)
3.42
Log S
-3.21
Log(Vapor Pressure)
-8.58
Melting Point
151.04
pKa Acid
8.81
pKa Basic
6.03
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.8577
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.8577
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.7867
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.7867
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7517
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7517
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7367
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7367
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.7344
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.7344
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7164
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7164
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.7081
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.7081

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