Methyl [3-(3,7-dimethylocta-2,6-dienyl)-6-methyl-5-(3-methylbut-2-enyl)-1,4-dioxo-1,5, 8,8a-tetrahydro-4H-nathphalen-4a-yl)]-acetate - Compound Card

Methyl [3-(3,7-dimethylocta-2,6-dienyl)-6-methyl-5-(3-methylbut-2-enyl)-1,4-dioxo-1,5, 8,8a-tetrahydro-4H-nathphalen-4a-yl)]-acetate

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Methyl [3-(3,7-dimethylocta-2,6-dienyl)-6-methyl-5-(3-methylbut-2-enyl)-1,4-dioxo-1,5, 8,8a-tetrahydro-4H-nathphalen-4a-yl)]-acetate

Structure
Zoomed Structure
  • Family: Plantae - Annonaceae
  • Kingdom: Plantae
  • Class: Quinone
    • Subclass: Geranylbenzoquinonoid
Canonical Smiles COC(=O)C[C@]12C(=O)C(=CC(=O)[C@H]1CC=C(C2CC=C(C)C)C)C/C=C(/CCC=C(C)C)\C
InChI InChI=1S/C29H40O4/c1-19(2)9-8-10-21(5)12-14-23-17-26(30)25-16-13-22(6)24(15-11-20(3)4)29(25,28(23)32)18-27(31)33-7/h9,11-13,17,24-25H,8,10,14-16,18H2,1-7H3/b21-12+/t24?,25-,29-/m1/s1
InChIKey BAMNKMJGPYBJJR-RROKVSGJSA-N
Formula C29H40O4
HBA 4
HBD 0
MW 452.64
Rotatable Bonds 9
TPSA 60.44
LogP 6.64
Number Rings 2
Number Aromatic Rings 0
Heavy Atom Count 33
Formal Charge 0
Fraction CSP3 0.55
Exact Mass 452.29
Number of Lipinski Rule Violations 1
# Species Family Kingdom NCBI Taxonomy ID
1 Lettowianthus stellatus Annonaceae Plantae 489335

Showing of synonyms

  • Makangara JJ, Nkunya MH, et al. (2010). Geranylbenzoquinonoids from Lettowianthus stellatus fruits. Natural Product Research,2010,24(8),710-717. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O=C1C=CC(=O)C(C12)CC=CC2

Level: 0

Mol. Weight: 452.64 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.53
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.720
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-3.39

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.470
Plasma Protein Binding
98.82
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
1.680
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.850
Biodegradation
Safe
Carcinogenesis
Toxic
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.750
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
8.280
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-52.510
Rat (Acute)
2.450
Rat (Chronic Oral)
2.460
Fathead Minnow
5.840
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
470.780
Hydration Free Energy
-3.210
Log(D) at pH=7.4
5.040
Log(P)
8.09
Log S
-6.15
Log(Vapor Pressure)
-7.11
Melting Point
86.34
pKa Acid
11.31
pKa Basic
3.13
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.8888
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.8888
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8825
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8825
Beta-lactoglobulin P02754 LACB_BOVIN Bos taurus 3 0.8665
Beta-lactoglobulin P02754 LACB_BOVIN Bos taurus 3 0.8665
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8565
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.8565
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.8499
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.8499
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8435
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8435
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.8334
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial Q0QF01 SDHA_PIG Sus scrofa 3 0.8334
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.8233
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.8233
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8136
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8136
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8086
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8086
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.8060
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.8060
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.7927
Retinoic acid receptor RXR-alpha P19793 RXRA_HUMAN Homo sapiens 3 0.7927
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.7890
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.7890
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.7794
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.7794
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7766
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 3 0.7766
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 3 0.7709
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7709
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7709
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 3 0.7709
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.7690
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 3 0.7690
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7605
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7605
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7593
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7593
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7552
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7552
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7545
Photosynthetic reaction center cytochrome c subunit P07173 CYCR_BLAVI Blastochloris viridis 2 0.7545
Rhodopsin P02699 OPSD_BOVIN Bos taurus 2 0.7544
Rhodopsin P02699 OPSD_BOVIN Bos taurus 2 0.7544
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7534
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7534
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7477
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7477
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7440
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7440
3-ketosteroid dehydrogenase Q9RA02 Q9RA02_RHOER Rhodococcus erythropolis 2 0.7437
3-ketosteroid dehydrogenase Q9RA02 Q9RA02_RHOER Rhodococcus erythropolis 2 0.7437
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7424
Methylketone synthase I E0YCS2 E0YCS2_SOLHA Solanum habrochaites 2 0.7424
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7421
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7421
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7399
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7399
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7397
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7397
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7392
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7392
Sodium-dependent dopamine transporter Q7K4Y6 DAT_DROME Drosophila melanogaster 2 0.7382
Sodium-dependent dopamine transporter Q7K4Y6 DAT_DROME Drosophila melanogaster 2 0.7382
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7377
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7377
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7350
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7350
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7303
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7303
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7272
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7272
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7256
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7256
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7238
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7238
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7235
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7235
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7223
Nuclear receptor ROR-beta P45446 RORB_RAT Rattus norvegicus 2 0.7223
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7214
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7214
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 2 0.7205
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 2 0.7205
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7168
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7168
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7149
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7149
Enoyl-[acyl-carrier-protein] reductase [NADH] P9WGR1 INHA_MYCTU Mycobacterium tuberculosis 2 0.7121
Enoyl-[acyl-carrier-protein] reductase [NADH] P9WGR1 INHA_MYCTU Mycobacterium tuberculosis 2 0.7121
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7116
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7116
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 2 0.7114
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 2 0.7114
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7061
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7061
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7038
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7038
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7029
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7029
Methyl-branched lipid omega-hydroxylase P9WPP3 CP124_MYCTU Mycobacterium tuberculosis 3 0.7028
Methyl-branched lipid omega-hydroxylase P9WPP3 CP124_MYCTU Mycobacterium tuberculosis 3 0.7028
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7022
Soluble cytochrome b562 P0ABE7 C562_ECOLX Escherichia coli 2 0.7022
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 3 0.7018
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 3 0.7018
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7002
Sulfotransferase 2A1 Q06520 ST2A1_HUMAN Homo sapiens 2 0.7002

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