Cleistenediol D - Compound Card

Cleistenediol D

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Cleistenediol D

Structure
Zoomed Structure
  • Family: Plantae - Annonaceae
  • Kingdom: Plantae
  • Class: Cyclohexene Derivative
    • Subclass: Polyoxygenated Cyclohexene Derivative
Canonical Smiles CC(=O)O[C@H]1C=C[C@@H]([C@H]([C@@]1(O)COC(=O)c1ccccc1)O)OC(=O)C
InChI InChI=1S/C18H20O8/c1-11(19)25-14-8-9-15(26-12(2)20)18(23,16(14)21)10-24-17(22)13-6-4-3-5-7-13/h3-9,14-16,21,23H,10H2,1-2H3/t14-,15-,16+,18+/m0/s1
InChIKey MMESXCQWMJEGBH-LISAXSMJSA-N
Formula C18H20O8
HBA 8
HBD 2
MW 364.35
Rotatable Bonds 5
TPSA 119.36
LogP 0.37
Number Rings 2
Number Aromatic Rings 1
Heavy Atom Count 26
Formal Charge 0
Fraction CSP3 0.39
Exact Mass 364.12
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Cleistochlamys kirkii Annonaceae Plantae 1237197

Showing of synonyms

  • Nyandoro SS, Munissi JJ, et al. (2017). Polyoxygenated cyclohexenes and other constituents of Cleistochlamys kirkii leaves. Journal of Natural Products,2017,80(1),114-125. [View] [PubMed]
Pubchem: 56958772
Nmrshiftdb2: 70087696

No compound-protein relationship available.

Structure

SMILES: c1ccccc1C(=O)OCC2CC=CCC2

Level: 1

Mol. Weight: 364.35 g/mol

Structure

SMILES: C1=CCCCC1

Level: 0

Mol. Weight: 364.35 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 364.35 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.23
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.58
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.97

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.44
Plasma Protein Binding
60.48
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
5.48
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Safe
Bioconcentration Factor
-0.27
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
1.64
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
6.1
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2.53
Rat (Acute)
2.08
Rat (Chronic Oral)
3.16
Fathead Minnow
4.09
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
369.2
Hydration Free Energy
-10.27
Log(D) at pH=7.4
0.77
Log(P)
1.42
Log S
-2.53
Log(Vapor Pressure)
-8.15
Melting Point
144.3
pKa Acid
6.59
pKa Basic
1.47
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.9533
Lactoperoxidase P80025 PERL_BOVIN Bos taurus 3 0.9533
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.9182
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.9182
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8789
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.8789
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.8511
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.8511
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8487
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.8487
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 4 0.8437
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 4 0.8437
Cytochrome P450 S6BVH1 S6BVH1_RHOER Rhodococcus erythropolis 3 0.8147
Cytochrome P450 S6BVH1 S6BVH1_RHOER Rhodococcus erythropolis 3 0.8147
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7878
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7878
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 4 0.7667
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 4 0.7667
Chymotrypsinogen A P00766 CTRA_BOVIN Bos taurus 3 0.7658
Chymotrypsinogen A P00766 CTRA_BOVIN Bos taurus 3 0.7658
Class B acid phosphatase Q540U1 APHA_SALTM Salmonella typhimurium 2 0.7564
Class B acid phosphatase Q540U1 APHA_SALTM Salmonella typhimurium 2 0.7564
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7558
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7558
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7446
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7446
Iota toxin component Ia Q46220 Q46220_CLOPF Clostridium perfringens 3 0.7388
Iota toxin component Ia Q46220 Q46220_CLOPF Clostridium perfringens 3 0.7388
Caffeoyl-CoA O-methyltransferase Q40313 CAMT_MEDSA Medicago sativa 3 0.7332
Caffeoyl-CoA O-methyltransferase Q40313 CAMT_MEDSA Medicago sativa 3 0.7332
Agglutinin alpha chain P18674 LECA_MACPO Maclura pomifera 3 0.7320
Agglutinin alpha chain P18674 LECA_MACPO Maclura pomifera 3 0.7320
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7273
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7273
Nicotinamide phosphoribosyltransferase P43490 NAMPT_HUMAN Homo sapiens 3 0.7248
Nicotinamide phosphoribosyltransferase P43490 NAMPT_HUMAN Homo sapiens 3 0.7248
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7232
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7232
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.7228
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 3 0.7228
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7211
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 2 0.7211
Multidrug efflux pump subunit AcrB P31224 ACRB_ECOLI Escherichia coli 4 0.7201
Multidrug efflux pump subunit AcrB P31224 ACRB_ECOLI Escherichia coli 4 0.7201
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7178
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7178
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7163
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7163
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7154
Avidin P02701 AVID_CHICK Gallus gallus 2 0.7154
Multidrug transporter MdfA P0AEY8 MDFA_ECOLI Escherichia coli 3 0.7145
Multidrug transporter MdfA P0AEY8 MDFA_ECOLI Escherichia coli 3 0.7145
CCA-adding enzyme O28126 CCA_ARCFU Archaeoglobus fulgidus 2 0.7139
CCA-adding enzyme O28126 CCA_ARCFU Archaeoglobus fulgidus 2 0.7139
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7137
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7137
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 2 0.7124
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.7124
ATP-dependent molecular chaperone HSP82 P02829 HSP82_YEAST Saccharomyces cerevisiae 2 0.7124
Lysozyme C II P11941 LYSC2_ONCMY Oncorhynchus mykiss 3 0.7124
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7107
Glycogen synthase kinase-3 beta P49841 GSK3B_HUMAN Homo sapiens 2 0.7107
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 2 0.7095
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 2 0.7095
Multidrug efflux pump subunit AcrB P31224 ACRB_ECOLI Escherichia coli 3 0.7084
Multidrug efflux pump subunit AcrB P31224 ACRB_ECOLI Escherichia coli 3 0.7084
NAD(P) transhydrogenase subunit alpha part 1 Q2RSB2 PNTAA_RHORT Rhodospirillum rubrum 3 0.7071
NAD(P) transhydrogenase subunit alpha part 1 Q2RSB2 PNTAA_RHORT Rhodospirillum rubrum 3 0.7071
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase P0AF12 MTNN_ECOLI Escherichia coli 3 0.7066
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase P0AF12 MTNN_ECOLI Escherichia coli 3 0.7066
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7062
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7062
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 2 0.7053
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 2 0.7053
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7037
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7037
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.7009
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.7009

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