Kaempferide 3-O-beta-xylosyl (1→2)-beta-glucoside - Compound Card

Kaempferide 3-O-beta-xylosyl (1→2)-beta-glucoside

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Kaempferide 3-O-beta-xylosyl (1→2)-beta-glucoside

Structure
Zoomed Structure
  • Family: Plantae - Canellaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Flavonol Glycoside
Canonical Smiles OC[C@H]1O[C@@H](Oc2c(oc3c(c2=O)c(O)cc(c3)O)c2ccc(cc2)OC)[C@@H]([C@H]([C@@H]1O)O)O[C@@H]1OC[C@H]([C@@H]([C@H]1O)O)O
InChI InChI=1S/C27H30O15/c1-37-12-4-2-10(3-5-12)23-24(20(34)17-13(30)6-11(29)7-15(17)39-23)41-27-25(21(35)19(33)16(8-28)40-27)42-26-22(36)18(32)14(31)9-38-26/h2-7,14,16,18-19,21-22,25-33,35-36H,8-9H2,1H3/t14-,16-,18+,19-,21+,22-,25-,26+,27+/m1/s1
InChIKey RLIQZPDFYSRCAD-QJQOJWJKSA-N
Formula C27H30O15
HBA 15
HBD 8
MW 594.52
Rotatable Bonds 7
TPSA 238.2
LogP -1.48
Number Rings 5
Number Aromatic Rings 3
Heavy Atom Count 42
Formal Charge 0
Fraction CSP3 0.44
Exact Mass 594.16
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Warburgia ugandensis Canellaceae Plantae 549619

Showing of synonyms

  • Manguro LO, Ugi I, et al. (2003). Flavonol glycosides of Warburgia ugandensis leaves. Phytochemistry,2003,64(4),891-896. [View] [PubMed]
Pubchem: 21576550
Nmrshiftdb2: 60024085

No compound-protein relationship available.

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC(OCCC4)C4OC5CCCCO5

Level: 3

Mol. Weight: 594.52 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC(OCCC3)C3OC4CCCCO4

Level: 2

Mol. Weight: 594.52 g/mol

Structure

SMILES: c1cccc(c12)oc(-c3ccccc3)c(c2=O)OC4CCCCO4

Level: 2

Mol. Weight: 594.52 g/mol

Structure

SMILES: c1cccc(c12)occ(c2=O)OC3CCCCO3

Level: 1

Mol. Weight: 594.52 g/mol

Structure

SMILES: c1cccc(c12)oc(cc2=O)-c3ccccc3

Level: 1

Mol. Weight: 594.52 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 594.52 g/mol

Structure

SMILES: c1cccc(c12)occc2=O

Level: 0

Mol. Weight: 594.52 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 594.52 g/mol

Structure

SMILES: c1ccccc1

Level: 0

Mol. Weight: 594.52 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.69
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.200
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
6.98

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.850
Plasma Protein Binding
64.86
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.850
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-2.610
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.720
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
5.730
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-10837.780
Rat (Acute)
2.390
Rat (Chronic Oral)
4.480
Fathead Minnow
24.480
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
474.290
Hydration Free Energy
-2.930
Log(D) at pH=7.4
0.170
Log(P)
-0.07
Log S
-4.21
Log(Vapor Pressure)
-12.8
Melting Point
190.92
pKa Acid
4.12
pKa Basic
4.4
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.9500
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.9500
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.9147
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.9147
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8932
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 4 0.8932
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8741
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 3 0.8741
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8338
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8338
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8223
Epidermal growth factor receptor P00533 EGFR_HUMAN Homo sapiens 3 0.8223
Protease Do-like 2, chloroplastic O82261 DEGP2_ARATH Arabidopsis thaliana 5 0.8194
Protease Do-like 2, chloroplastic O82261 DEGP2_ARATH Arabidopsis thaliana 5 0.8194
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.8178
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.8178
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.8175
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.8175
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.8019
Leucoanthocyanidin dioxygenase Q96323 LDOX_ARATH Arabidopsis thaliana 4 0.8019
HTH-type transcriptional regulator TtgR Q9AIU0 TTGR_PSEPT Pseudomonas putida 3 0.7960
HTH-type transcriptional regulator TtgR Q9AIU0 TTGR_PSEPT Pseudomonas putida 3 0.7960
Putative protease I Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron 3 0.7879
Putative protease I Q8A8A4 Q8A8A4_BACTN Bacteroides thetaiotaomicron 3 0.7879
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.7870
Anthocyanidin 3-O-glucosyltransferase UFGT P51094 UFOG_VITVI Vitis vinifera 4 0.7870
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7775
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7775
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7723
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 3 0.7723
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 5 0.7639
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 5 0.7639
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7634
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform O02697 PK3CG_PIG Sus scrofa 5 0.7634
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.7611
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.7611
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7566
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7566
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7557
Transcriptional regulator, PadR-like family A2RI36 A2RI36_LACLM Lactococcus lactis subsp. cremoris 3 0.7557
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7438
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7438
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7434
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7434
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.7409
Rhodopsin kinase GRK1 P28327 GRK1_BOVIN Bos taurus 3 0.7409
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.7354
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.7354
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7344
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7344
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7326
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7326
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7320
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 2 0.7320
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 3 0.7300
Flavoredoxin Q72HI0 Q72HI0_THET2 Thermus thermophilus 3 0.7300
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7276
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7276
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7242
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7242
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7227
Nitric oxide synthase oxygenase O34453 NOSO_BACSU Bacillus subtilis 3 0.7227
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7197
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7197
HTH-type transcriptional regulator QacR P0A0N4 QACR_STAAU Staphylococcus aureus 3 0.7178
HTH-type transcriptional regulator QacR P0A0N4 QACR_STAAU Staphylococcus aureus 3 0.7178
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7140
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7140
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7120
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7120
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7115
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7115
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7076
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7076
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 5 0.7019
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 5 0.7019
Protein polybromo-1 Q86U86 PB1_HUMAN Homo sapiens 5 0.7016
Protein polybromo-1 Q86U86 PB1_HUMAN Homo sapiens 5 0.7016
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7012
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7012
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7011
Serine/threonine-protein kinase PLK1 P53350 PLK1_HUMAN Homo sapiens 3 0.7011

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