Shinpterocarpin - Compound Card

Shinpterocarpin

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Shinpterocarpin

Structure
Zoomed Structure
  • Family: Plantae - Leguminosae/Fabaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Pterocarpan
Canonical Smiles Oc1ccc2c(c1)O[C@@H]1[C@H]2COc2c1ccc1c2C=CC(O1)(C)C
InChI InChI=1S/C20H18O4/c1-20(2)8-7-13-16(24-20)6-5-14-18(13)22-10-15-12-4-3-11(21)9-17(12)23-19(14)15/h3-9,15,19,21H,10H2,1-2H3/t15-,19-/m0/s1
InChIKey QGPHRCQDTPCIQI-KXBFYZLASA-N
Formula C20H18O4
HBA 4
HBD 1
MW 322.36
Rotatable Bonds 0
TPSA 47.92
LogP 4.19
Number Rings 5
Number Aromatic Rings 2
Heavy Atom Count 24
Formal Charge 0
Fraction CSP3 0.3
Exact Mass 322.12
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Erythrina abyssinica Leguminosae/Fabaceae Plantae 1237573
2 Erythrina sacleuxii Leguminosae/Fabaceae Plantae 1899109
3 Erythrina sacleuxii Leguminosae/Fabaceae Plantae 1899109

Showing of synonyms

  • Yenesew A, Twinomuhwezi H, et al. (2009). 8-Methoxyneorautenol and radical scavenging flavonoids from Erythrina abyssinica.. Bulletin of the Chemical Society of Ethiopia,2009,23(2),205-210. [View] [PubMed]
  • Andayi AW, Yenesew A, et al. (2006). Antiplasmodial flavonoids from Erythrina sacleuxii.. Planta Medica,2006,72(2),187-189. [View] [PubMed]
  • Yenesew A, Midiwo JO, et al. (2000). Two isoflavanones from the stem bark of Erythrina sacleuxii.. Phytochemistry,2000,55(5),457-459. [View] [PubMed]
Pubchem: 10336244
Nmrshiftdb2: 60072542
CPRiL: 449736
Structure

SMILES: c1cccc(c12)OC3C2COc4c3ccc5c4C=CCO5

Level: 0

Mol. Weight: 322.36 g/mol

Anti-plasmodial
Radical scavenging towards 2;2-diphenyl-1-picrylhydrazyl radical (dpph)

Absorption

Caco-2 (logPapp)
-4.78
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.530
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-1.92

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.100
Plasma Protein Binding
79.41
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.860
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.750
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.280
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
6.640
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
1.360
Rat (Acute)
2.640
Rat (Chronic Oral)
1.670
Fathead Minnow
4.620
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
445.430
Hydration Free Energy
-7.910
Log(D) at pH=7.4
3.900
Log(P)
4.33
Log S
-5.06
Log(Vapor Pressure)
-8.54
Melting Point
193.0
pKa Acid
10.5
pKa Basic
6.2
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.9574
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.9574
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.9540
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.9540
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8682
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8682
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8678
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8678
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.8487
Beta-lactamase Q9L5C8 Q9L5C8_ECOLX Escherichia coli 3 0.8487
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8445
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8445
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.8402
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 3 0.8402
Sulfotransferase 1A1 P50225 ST1A1_HUMAN Homo sapiens 3 0.8366
Sulfotransferase 1A1 P50225 ST1A1_HUMAN Homo sapiens 3 0.8366
Apoptosis regulator Bcl-2 P10415 BCL2_HUMAN Homo sapiens 3 0.8326
Apoptosis regulator Bcl-2 P10415 BCL2_HUMAN Homo sapiens 3 0.8326
Beta-2-microglobulin P61769 B2MG_HUMAN Homo sapiens 3 0.8188
Beta-2-microglobulin P61769 B2MG_HUMAN Homo sapiens 3 0.8188
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.8123
Kinesin-like protein KIF11 P52732 KIF11_HUMAN Homo sapiens 3 0.8123
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.7967
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.7967
histidine kinase O32393 O32393_ARTPT Arthrospira platensis 3 0.7902
histidine kinase O32393 O32393_ARTPT Arthrospira platensis 3 0.7902
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.7880
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.7880
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.7803
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.7803
Vitamin D3 dihydroxylase P18326 CPXE_STRGO Streptomyces griseolus 3 0.7663
Vitamin D3 dihydroxylase P18326 CPXE_STRGO Streptomyces griseolus 3 0.7663
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7657
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7657
Vitamin D3 dihydroxylase P18326 CPXE_STRGO Streptomyces griseolus 3 0.7624
Vitamin D3 dihydroxylase P18326 CPXE_STRGO Streptomyces griseolus 3 0.7624
Aldo-keto reductase family 1 member B10 O60218 AK1BA_HUMAN Homo sapiens 3 0.7607
Aldo-keto reductase family 1 member B10 O60218 AK1BA_HUMAN Homo sapiens 3 0.7607
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 3 0.7544
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 3 0.7544
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.7520
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 3 0.7520
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7514
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7514
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7464
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7464
TDP-4-oxo-6-deoxy-alpha-D-glucose-3,4-oxoisomerase Q6T1W8 FDTA_ANETH Aneurinibacillus thermoaerophilus 3 0.7433
TDP-4-oxo-6-deoxy-alpha-D-glucose-3,4-oxoisomerase Q6T1W8 FDTA_ANETH Aneurinibacillus thermoaerophilus 3 0.7433
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7411
Gag-Pol polyprotein P03367 POL_HV1BR Human immunodeficiency virus type 1 group M subtype B 3 0.7411
Glutathione S-transferase P P09211 GSTP1_HUMAN Homo sapiens 2 0.7397
Glutathione S-transferase P P09211 GSTP1_HUMAN Homo sapiens 2 0.7397
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7396
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7396
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 2 0.7393
Thymidylate synthase P00469 TYSY_LACCA Lacticaseibacillus casei 2 0.7393
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.7374
Neocarzinostatin P0A3R9 NCZS_STRCZ Streptomyces carzinostaticus 3 0.7374
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7357
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7357
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7283
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7283
Thymidylate synthase P0A886 TYSY_ECO57 Escherichia coli O157:H7 3 0.7257
Thymidylate synthase P0A886 TYSY_ECO57 Escherichia coli O157:H7 3 0.7257
Lanosterol 14-alpha-demethylase Q385E8 Q385E8_TRYB2 Trypanosoma brucei brucei 3 0.7255
Lanosterol 14-alpha-demethylase Q385E8 Q385E8_TRYB2 Trypanosoma brucei brucei 3 0.7255
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7240
Catechol O-methyltransferase P22734 COMT_RAT Rattus norvegicus 3 0.7240
Pteridine reductase O76290 O76290_TRYBB Trypanosoma brucei brucei 2 0.7224
Pteridine reductase O76290 O76290_TRYBB Trypanosoma brucei brucei 2 0.7224
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7213
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7213
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7209
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7209
Aldehyde dehydrogenase, mitochondrial P05091 ALDH2_HUMAN Homo sapiens 4 0.7206
Aldehyde dehydrogenase, mitochondrial P05091 ALDH2_HUMAN Homo sapiens 4 0.7206
Dihydrofolate reductase Q83AB2 Q83AB2_COXBU Coxiella burnetii 3 0.7200
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7200
Dihydrofolate reductase Q83AB2 Q83AB2_COXBU Coxiella burnetii 3 0.7200
Cytosolic purine 5'-nucleotidase P49902 5NTC_HUMAN Homo sapiens 2 0.7200
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 3 0.7193
tyrosine--tRNA ligase Q4QFJ7 Q4QFJ7_LEIMA Leishmania major 3 0.7193
4-hydroxyphenylacetate 3-monooxygenase Q8YHT7 Q8YHT7_BRUME Brucella melitensis biotype 1 2 0.7184
4-hydroxyphenylacetate 3-monooxygenase Q8YHT7 Q8YHT7_BRUME Brucella melitensis biotype 1 2 0.7184
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7161
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7161
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7128
Mitogen-activated protein kinase 14 Q16539 MK14_HUMAN Homo sapiens 3 0.7128
Cytidylate kinase Q5SL35 KCY_THET8 Thermus thermophilus 3 0.7122
Cytidylate kinase Q5SL35 KCY_THET8 Thermus thermophilus 3 0.7122
Dihydrofolate reductase P22906 DYR_CANAX Candida albicans 3 0.7114
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7114
Dihydrofolate reductase P22906 DYR_CANAX Candida albicans 3 0.7114
3-hydroxyanthranilate 3,4-dioxygenase Q1LCS4 3HAO_CUPMC Cupriavidus metallidurans 2 0.7114
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.7108
Cytochrome P450 monooxygenase Q5YNS8 Q5YNS8_NOCFA Nocardia farcinica 3 0.7108
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7102
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7102
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7096
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 3 0.7096
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 2 0.7095
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 2 0.7095
Cytochrome P450 2C8 P10632 CP2C8_HUMAN Homo sapiens 3 0.7090
Cytochrome P450 2C8 P10632 CP2C8_HUMAN Homo sapiens 3 0.7090
Poly [ADP-ribose] polymerase tankyrase-1 O95271 TNKS1_HUMAN Homo sapiens 2 0.7047
Poly [ADP-ribose] polymerase tankyrase-1 O95271 TNKS1_HUMAN Homo sapiens 2 0.7047
Holliday junction branch migration complex subunit RuvB Q9PMT7 RUVB_CAMJE Campylobacter jejuni subsp. jejuni serotype O:2 2 0.7045
Holliday junction branch migration complex subunit RuvB Q9PMT7 RUVB_CAMJE Campylobacter jejuni subsp. jejuni serotype O:2 2 0.7045
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 3 0.7039
cAMP-dependent protein kinase catalytic subunit alpha P00517 KAPCA_BOVIN Bos taurus 3 0.7039
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7001
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 2 0.7001

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