Rotenone - Compound Card

Rotenone

Select a section from the left sidebar

Rotenone

Structure
Zoomed Structure
  • Family: Plantae - Leguminosae/Fabaceae
  • Kingdom: Plantae
  • Class: Flavonoid
    • Subclass: Rotenoid
Canonical Smiles COc1cc2c(cc1OC)OC[C@@H]1[C@H]2C(=O)c2c(O1)c1C[C@@H](Oc1cc2)C(=C)C
InChI InChI=1S/C23H22O6/c1-11(2)16-8-14-15(28-16)6-5-12-22(24)21-13-7-18(25-3)19(26-4)9-17(13)27-10-20(21)29-23(12)14/h5-7,9,16,20-21H,1,8,10H2,2-4H3/t16-,20-,21+/m1/s1
InChIKey JUVIOZPCNVVQFO-HBGVWJBISA-N
Formula C23H22O6
HBA 6
HBD 0
MW 394.42
Rotatable Bonds 3
TPSA 63.22
LogP 3.7
Number Rings 5
Number Aromatic Rings 2
Heavy Atom Count 29
Formal Charge 0
Fraction CSP3 0.35
Exact Mass 394.14
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Millettia dura Leguminosae/Fabaceae Plantae 62119
2 Derris trifoliata Leguminosae/Fabaceae Plantae 185716
3 Derris trifoliata Leguminosae/Fabaceae Plantae 185716
4 Derris trifoliata Leguminosae/Fabaceae Plantae 185716
5 Derris trifoliata Leguminosae/Fabaceae Plantae 185716
6 Tephrosia villosa Leguminosae/Fabaceae Plantae 62125
7 Tephrosia vogelii Leguminosae/Fabaceae Plantae 1157238
8 Neorautanenia mitis Leguminosae/Fabaceae Plantae 167620

Showing of synonyms

  • Muiva-Mutisya L, Macharia B, et al. (2014). 6α-Hydroxy-α-toxicarol and (+)-tephrodin with antiplasmodial activities from Tephrosia species.. Phytochemistry Letters,2014,10,179-183. [View] [PubMed]
  • Yenesew A, Mushibe EK, et al. (2005). 7a-O-methyldeguelol, a modified rotenoid with an open ring-C, from the roots of Derris trifoliata.. Phytochemistry,2005,66(6),653-657. [View] [PubMed]
  • Yenesew AB, Twinomuhwezi H, et al. (2009). Antiplasmodial and larvicidal flavonoids from Derris trifoliata.. Bulletin of the Chemical Society of Ethiopia,2009,23(3),409-414. [View] [PubMed]
  • Stevenson PC, Kite GC, et al. (2012). Distinct chemotypes of Tephrosia vogelii and implications for their use in pest control and soil enrichment.. Phytochemistry,2012(78),135-146. [View] [PubMed]
  • Yenesew A, Derese S, et al. (2003). Effect of rotenoids from the seeds of Millettia dura on larvae of Aedes aegypti.. Pest Management Science,2003,59(10),1159-1161. [View] [PubMed]
  • Sakurai Y, Sakurai N, et al. (2006). Rautandiols A and B, pterocarpans and cytotoxic constituents from Neorautanenia mitis.. Journal of Natural Products,2006,69(3),397-399. [View] [PubMed]
  • Yenesew A, Kiplagat JT Mushibe EK Derese S, et al. (2005). Rotenoid derivatives from Kenyan Millettia and Derris species as larvicidal agents. Natural products and drug discovery, Proceedings of the 11th NAPRECA Symposium August 9-12, 2005, Hôtel Panorama, Antananarivo, Madagascar. [View] [PubMed]
  • Yenesew A1, Kiplagat JT, et al. (2006). Two unusual rotenoid derivatives, 7a-O-methyl-12a-hydroxydeguelol and spiro-13-homo-13-oxaelliptone, from the seeds of Derris trifoliata.. Phytochemistry,2006,67(10):988-991. [View] [PubMed]
Pubchem: 6758
Kegg Ligand: C07593
Chebi: 28201
Nmrshiftdb2: 60066336
Metabolights: MTBLC28201
Drugbank: DB11457
Pdb Ligand: 970
Bindingdb: 50135527
CPRiL: 8813
Structure

SMILES: C1COc(c12)ccc3c2OC4C(C3=O)c5c(OC4)cccc5

Level: 0

Mol. Weight: 394.42 g/mol

Anti-plasmodial
Cytotoxic
Larvicidal

Absorption

Caco-2 (logPapp)
-4.91
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.610
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.12

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
1.370
Plasma Protein Binding
84.14
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
11.230
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
1.120
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.090
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
7.880
Micronucleos
Toxic
NR-AhR
Toxic
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-34.950
Rat (Acute)
3.700
Rat (Chronic Oral)
1.820
Fathead Minnow
5.050
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Toxic
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
478.690
Hydration Free Energy
-5.040
Log(D) at pH=7.4
3.100
Log(P)
4.08
Log S
-5.47
Log(Vapor Pressure)
-8.56
Melting Point
177.18
pKa Acid
9.02
pKa Basic
3.31
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.9579
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 3 0.9579
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8983
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.8983
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8944
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8944
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.8900
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.8900
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8674
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8674
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8625
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8625
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Q33862 Q33862_ASCSU Ascaris suum 3 0.8529
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Q33862 Q33862_ASCSU Ascaris suum 3 0.8529
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 3 0.8354
Tetracycline repressor protein class H P51561 TETR8_PASMD Pasteurella multocida 3 0.8354
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 3 0.8204
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 3 0.8204
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.8139
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.8139
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8074
cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A Q9Y233 PDE10_HUMAN Homo sapiens 3 0.8074
Beta-elicitin cinnamomin P15569 ELIB_PHYCI Phytophthora cinnamomi 3 0.7976
Beta-elicitin cinnamomin P15569 ELIB_PHYCI Phytophthora cinnamomi 3 0.7976
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7832
Mitogen-activated protein kinase 8 P45983 MK08_HUMAN Homo sapiens 3 0.7832
Activin receptor type-1 Q04771 ACVR1_HUMAN Homo sapiens 3 0.7777
Activin receptor type-1 Q04771 ACVR1_HUMAN Homo sapiens 3 0.7777
Steroid C26-monooxygenase P9WPP1 CP125_MYCTU Mycobacterium tuberculosis 3 0.7771
Steroid C26-monooxygenase P9WPP1 CP125_MYCTU Mycobacterium tuberculosis 3 0.7771
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 3 0.7724
Acetolactate synthase, chloroplastic P17597 ILVB_ARATH Arabidopsis thaliana 3 0.7724
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7696
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.7696
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7662
Gag-Pol polyprotein P12497 POL_HV1N5 Human immunodeficiency virus type 1 group M subtype B 3 0.7662
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7643
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7643
Steroid C26-monooxygenase P9WPP1 CP125_MYCTU Mycobacterium tuberculosis 3 0.7616
Steroid C26-monooxygenase P9WPP1 CP125_MYCTU Mycobacterium tuberculosis 3 0.7616
cGMP-dependent protein kinase 1 Q13976 KGP1_HUMAN Homo sapiens 3 0.7592
cGMP-dependent protein kinase 1 Q13976 KGP1_HUMAN Homo sapiens 3 0.7592
Vitamin D3 dihydroxylase P18326 CPXE_STRGO Streptomyces griseolus 3 0.7583
Vitamin D3 dihydroxylase P18326 CPXE_STRGO Streptomyces griseolus 3 0.7583
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 3 0.7575
Gag-Pol polyprotein P05896 POL_SIVM1 Simian immunodeficiency virus 3 0.7575
Isoflavone-7-O-methyltransferase 8 O24529 7OMT8_MEDSA Medicago sativa 4 0.7548
Isoflavone-7-O-methyltransferase 8 O24529 7OMT8_MEDSA Medicago sativa 4 0.7548
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.7542
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 3 0.7542
Sulfotransferase 1E1 P49888 ST1E1_HUMAN Homo sapiens 3 0.7491
Sulfotransferase 1E1 P49888 ST1E1_HUMAN Homo sapiens 3 0.7491
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.7398
Nodulin-13 P93330 NOD13_MEDTR Medicago truncatula 3 0.7398
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 2 0.7361
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 2 0.7361
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7284
Serine/threonine-protein kinase 24 Q9Y6E0 STK24_HUMAN Homo sapiens 3 0.7284
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 3 0.7240
Bifunctional epoxide hydrolase 2 P34913 HYES_HUMAN Homo sapiens 3 0.7240
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.7207
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.7207
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7146
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7146
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7144
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7144
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7110
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7110
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 2 0.7098
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 2 0.7098
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7062
Neuropilin-1 O14786 NRP1_HUMAN Homo sapiens 3 0.7062
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7062
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7062
Protein BRASSINOSTEROID INSENSITIVE 1 O22476 BRI1_ARATH Arabidopsis thaliana 4 0.7061
Protein BRASSINOSTEROID INSENSITIVE 1 O22476 BRI1_ARATH Arabidopsis thaliana 4 0.7061
Serine/threonine-protein kinase 10 O94804 STK10_HUMAN Homo sapiens 3 0.7056
Serine/threonine-protein kinase 10 O94804 STK10_HUMAN Homo sapiens 3 0.7056
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7029
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7029
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7007
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7007

Download SDF