Hydroxysenkirkine - Compound Card

Hydroxysenkirkine

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Hydroxysenkirkine

Structure
Zoomed Structure
  • Family: Plantae - Leguminosae/Fabaceae
  • Kingdom: Plantae
  • Class: Alkaloid
Canonical Smiles C/C=C\1/C[C@@H](C)[C@](O)(CO)C(=O)OCC2=CC[N+]3([C@]2([C@H](OC1=O)CC3)O)C
InChI InChI=1S/C19H28NO7/c1-4-13-9-12(2)18(24,11-21)17(23)26-10-14-5-7-20(3)8-6-15(19(14,20)25)27-16(13)22/h4-5,12,15,21,24-25H,6-11H2,1-3H3/q+1/b13-4-/t12-,15-,18-,19+,20?/m1/s1
InChIKey CRWHRMSWJOLABX-NXWCFRFGSA-N
Formula C19H28NO7+
HBA 7
HBD 3
MW 382.43
Rotatable Bonds 1
TPSA 113.29
LogP -0.37
Number Rings 3
Number Aromatic Rings 0
Heavy Atom Count 27
Formal Charge 1
Fraction CSP3 0.68
Exact Mass 382.19
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Crotalaria laburnifolia Leguminosae/Fabaceae Plantae 992673

Showing of synonyms

  • Asres K, Sporer F, et al. (2004). Patterns of pyrrolizidine alkaloids in 12 Ethiopian Crotalaria species.. Biochemical systematics and ecology,2004,32(10),915-930. [View] [PubMed]
Pubchem: 53297431
Kegg Ligand: C19435
Chebi: 82476

No compound-protein relationship available.

Structure

SMILES: C1OC(=O)CCCC(=C)C(=O)OC(C2C1=3)CC[NH+]2CC3

Level: 0

Mol. Weight: 382.43 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.18
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-4.91
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-2.93

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.52
Plasma Protein Binding
28.26
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.4
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Toxic
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.21
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.66
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
9.75
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-9.21
Rat (Acute)
2.86
Rat (Chronic Oral)
2.15
Fathead Minnow
4.03
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
410.46
Hydration Free Energy
-12.08
Log(D) at pH=7.4
-0.37
Log(P)
-2.8
Log S
-0.92
Log(Vapor Pressure)
-10.36
Melting Point
221.26
pKa Acid
4.75
pKa Basic
4.21
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.9240
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.9240
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7632
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7632
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7435
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7435
Multidrug transporter MdfA P0AEY8 MDFA_ECOLI Escherichia coli 3 0.7418
Multidrug transporter MdfA P0AEY8 MDFA_ECOLI Escherichia coli 3 0.7418
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7416
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7416
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7410
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7410
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7220
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 3 0.7220
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7192
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7192
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7135
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7135

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