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Lithospermoside
- Family: Plantae - Leguminosae/Fabaceae
- Kingdom: Plantae
- Class: Cyanoglucoside
Canonical Smiles | N#C/C=C\1/C=C[C@H]([C@@H]([C@H]1O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O)O |
---|---|
InChI | InChI=1S/C14H19NO8/c15-4-3-6-1-2-7(17)9(18)13(6)23-14-12(21)11(20)10(19)8(5-16)22-14/h1-3,7-14,16-21H,5H2/b6-3-/t7-,8-,9+,10-,11+,12-,13+,14+/m1/s1 |
InChIKey | WIIDBJNWXCWLKF-VVAXPEBGSA-N |
Formula | C14H19NO8 |
HBA | 9 |
HBD | 6 |
MW | 329.31 |
Rotatable Bonds | 3 |
TPSA | 163.63 |
LogP | -3.09 |
Number Rings | 2 |
Number Aromatic Rings | 0 |
Heavy Atom Count | 23 |
Formal Charge | 0 |
Fraction CSP3 | 0.64 |
Exact Mass | 329.11 |
Number of Lipinski Rule Violations | 1 |
# | Species | Family | Kingdom | NCBI Taxonomy ID |
---|---|---|---|---|
1 | Bauhinia fassoglensis | Leguminosae/Fabaceae | Plantae | 228518 |
Showing of synonyms
Lithospermoside
63492-69-3
Griffonin
DTXSID101317116
(2Z)-2-[(4R,5S,6S)-4,5-dihydroxy-6-[(2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxycyclohex-2-en-1-ylidene]acetonitrile
NSC 290807
(2Z)-2-((4R,5S,6S)-4,5-dihydroxy-6-((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl)oxycyclohex-2-en-1-ylidene)acetonitrile
DTXCID501746933
Acetonitrile, (6-(beta-D-glucopyranosyloxy)-4,5-dihydroxy-2-cyclohexen-1-ylidene)-, (12,4alpha,5beta,6alpha)-(-)-
CHEBI:81324
(Z)-2-((4R,5S,6S)-4,5-Dihydroxy-6-(((2R,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)tetrahydro-2H-pyran-2-yl)oxy)cyclohex-2-en-1-ylidene)acetonitrile
Lithospermoside (Standard)
CHEMBL1817899
SCHEMBL21034847
HY-N0821R
HY-N0821
S9073
AKOS037514726
CCG-267800
AC-30270
AS-76615
DA-65011
CS-0009854
C17771
Q27155262
Pubchem:
10065132
Cas:
63492-69-3
Zinc:
ZINC000056874786
Kegg Ligand:
C17771
Chebi:
81324
Nmrshiftdb2:
60067422
Chembl:
CHEMBL1817899
No compound-protein relationship available.
SMILES: C=C1C=CCCC1OC2CCCCO2
Level: 1
Mol. Weight: 329.31 g/mol
SMILES: C=C1C=CCCC1
Level: 0
Mol. Weight: 329.31 g/mol
SMILES: C1CCOCC1
Level: 0
Mol. Weight: 329.31 g/mol
No bioactivities available.
Absorption
- Caco-2 (logPapp)
- -5.28
- Human Oral Bioavailability 20%
- Non-Bioavailable
- Human Intestinal Absorption
- Non-Absorbed
- Madin-Darby Canine Kidney
- -4.900
- Human Oral Bioavailability 50%
- Non-Bioavailable
- P-Glycoprotein Inhibitor
- Non-Inhibitor
- P-Glycoprotein Substrate
- Non-Substrate
- Skin Permeability
- -0.88
Distribution
- Blood-Brain Barrier (CNS)
- -
- Blood-Brain Barrier
- Non-Penetrable
- Fraction Unbound (Human)
- 0.710
- Plasma Protein Binding
- 47.97
- Steady State Volume of Distribution
- -
Metabolism
- Breast Cancer Resistance Protein
- Non-Inhibitor
- CYP 1A2 Inhibitor
- Non-Inhibitor
- CYP 1A2 Substrate
- Non-Substrate
- CYP 2C19 Inhibitor
- Non-Inhibitor
- CYP 2C19 Substrate
- Non-Substrate
- CYP 2C9 Inhibitor
- Non-Inhibitor
- CYP 2C9 Substrate
- Non-Substrate
- CYP 2D6 Inhibitor
- Non-Inhibitor
- CYP 2D6 Substrate
- Non-Substrate
- CYP 3A4 Inhibitor
- Non-Inhibitor
- CYP 3A4 Substrate
- Non-Substrate
- OATP1B1
- Non-Inhibitor
- OATP1B3
- Non-Inhibitor
Excretion
- Clearance
- 3.490
- Organic Cation Transporter 2
- Non-Inhibitor
- Half-Life of Drug
- -
Toxicity
- AMES Mutagenesis
- Safe
- Avian
- Safe
- Bee
- Toxic
- Bioconcentration Factor
- -2.760
- Biodegradation
- Toxic
- Carcinogenesis
- Safe
- Crustacean
- Safe
- Liver Injury I (DILI)
- Safe
- Eye Corrosion
- Safe
- Eye Irritation
- Safe
- Maximum Tolerated Dose
- 1.340
- Liver Injury II
- Safe
- hERG Blockers
- Safe
- Daphnia Maga
- 4.370
- Micronucleos
- Safe
- NR-AhR
- Safe
- NR-AR
- Safe
- NR-AR-LBD
- Safe
- NR-Aromatase
- Safe
- NR-ER
- Safe
- NR-ER-LBD
- Safe
- NR-GR
- Safe
- NR-PPAR-gamma
- Safe
- NR-TR
- Safe
- T. Pyriformis
- -6.520
- Rat (Acute)
- 2.470
- Rat (Chronic Oral)
- 3.390
- Fathead Minnow
- 2.770
- Respiratory Disease
- Safe
- Skin Sensitisation
- Toxic
- SR-ARE
- Safe
- SR-ATAD5
- Safe
- SR-HSE
- Safe
- SR-MMP
- Safe
- SR-p53
- Safe
General Properties
- Boiling Point
- 487.690
- Hydration Free Energy
- -21.370
- Log(D) at pH=7.4
- -1.020
- Log(P)
- -2.26
- Log S
- -0.99
- Log(Vapor Pressure)
- -15.16
- Melting Point
- 150.41
- pKa Acid
- 5.29
- pKa Basic
- 5.01
Protein Name | UniProt ID | Entry Name | Species | #Pharmacophore Points | Probability (0.7 ≤ Tversky Score ≤ 1.0) |
---|---|---|---|---|---|
Glycogen synthase kinase-3 beta | P49841 | GSK3B_HUMAN | Homo sapiens | 3 | 0.8679 |
Glycogen synthase kinase-3 beta | P49841 | GSK3B_HUMAN | Homo sapiens | 3 | 0.8679 |
Prolyl tripeptidyl peptidase | Q7MUW6 | PTP_PORGI | Porphyromonas gingivalis | 3 | 0.8262 |
Prolyl tripeptidyl peptidase | Q7MUW6 | PTP_PORGI | Porphyromonas gingivalis | 3 | 0.8262 |