(+)-vasicinone - Compound Card

(+)-vasicinone

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(+)-vasicinone

Structure
Zoomed Structure
  • Family: Plantae - Leguminosae/Fabaceae
  • Kingdom: Plantae
  • Class: Alkaloid
    • Subclass: Pyrrolo-Quinolizidine
Canonical Smiles O[C@@H]1CCn2c1nc1ccccc1c2=O
InChI InChI=1S/C11H10N2O2/c14-9-5-6-13-10(9)12-8-4-2-1-3-7(8)11(13)15/h1-4,9,14H,5-6H2/t9-/m1/s1
InChIKey SDIVYZXRQHWCKF-SECBINFHSA-N
Formula C11H10N2O2
HBA 4
HBD 1
MW 202.21
Rotatable Bonds 0
TPSA 55.12
LogP 0.83
Number Rings 3
Number Aromatic Rings 2
Heavy Atom Count 15
Formal Charge 0
Fraction CSP3 0.27
Exact Mass 202.07
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Galega lindblomi Leguminosae/Fabaceae Plantae
2 Galega battiscombei Leguminosae/Fabaceae Plantae

Showing of synonyms

  • Susag L, Mathenge S, et al. (2003). The alkaloids of two species of Afrogalega.. Biochemical systematics and ecology,2003,31(6),645-647. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C1CCn(c12)c(=O)c3c(n2)cccc3

Level: 0

Mol. Weight: 202.21 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.65
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.07
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.27

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.58
Plasma Protein Binding
52.4
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.2
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
0.79
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Toxic
Maximum Tolerated Dose
0.52
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
2.77
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
1.09
Rat (Acute)
2.4
Rat (Chronic Oral)
1.48
Fathead Minnow
3.92
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
362.86
Hydration Free Energy
-11.43
Log(D) at pH=7.4
0.52
Log(P)
0.47
Log S
-1.95
Log(Vapor Pressure)
-7.14
Melting Point
201.0
pKa Acid
11.0
pKa Basic
4.99
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Nuclear receptor subfamily 4immunitygroup A member 1 P22736 NR4A1_HUMAN Homo sapiens 3 0.9528
Ceramide transfer protein Q9Y5P4 CERT_HUMAN Homo sapiens 3 0.9466
Odorant-binding protein P81245 OBP_PIG Sus scrofa 3 0.9332
Mycinamicin III 3''-O-methyltransferase Q49492 MYCF_MICGR Micromonospora griseorubida 2 0.9192
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.9180
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform P48736 PK3CG_HUMAN Homo sapiens 4 0.9168
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.9093
Albumin P02768 ALBU_HUMAN Homo sapiens 3 0.8949
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 4 0.8683
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8669
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.8653
Pteridine reductase, putative Q581W1 Q581W1_TRYB2 Trypanosoma brucei brucei 3 0.8641
Gag-Pol polyprotein P04585 POL_HV1H2 Human immunodeficiency virus type 1 group M subtype B 3 0.8577
Biflaviolin synthase CYP158A1 Q9KZF5 C1581_STRCO Streptomyces coelicolor / M145) 3 0.8567
Succinate dehydrogenase flavoprotein subunit P0AC41 SDHA_ECOLI Escherichia coli 3 0.8322
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase F6MZ55 F6MZ55_9FIRM Sporomusa ovata 3 0.8237
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 3 0.8174
Alcohol dehydrogenase E chain P00327 ADH1E_HORSE Equus caballus 3 0.8099
Gag-Pol polyprotein P03366 POL_HV1B1 Human immunodeficiency virus type 1 group M subtype B 3 0.8094
AGAP003309-PA A0A1U7F4W2 A0A1U7F4W2_ANOGA Anopheles gambiae 3 0.8088
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.8042
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase F6MZ55 F6MZ55_9FIRM Sporomusa ovata 3 0.8037
D(3) dopamine receptor P35462 DRD3_HUMAN Homo sapiens 3 0.8023
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.8000
Acetylcholinesterase P22303 ACES_HUMAN Homo sapiens 3 0.7947
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7910
Dihydropteroate synthase Q81VW8 Q81VW8_BACAN Bacillus anthracis 3 0.7873
Dihydropteroate synthase Q81VW8 Q81VW8_BACAN Bacillus anthracis 4 0.7851
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7850
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.7841
Chloramphenicol acetyltransferase P62577 CAT_ECOLX Escherichia coli 2 0.7737
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 4 0.7734
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7722
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7722
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7705
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7699
Camphor 5-monooxygenase P00183 CPXA_PSEPU Pseudomonas putida 3 0.7685
Purine nucleoside phosphorylase DeoD-type P0ABP8 DEOD_ECOLI Escherichia coli 3 0.7652
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.7650
Aldo-keto reductase family 1 member B1 P80276 ALDR_PIG Sus scrofa 4 0.7590
Aldo-keto reductase family 1 member B10 O60218 AK1BA_HUMAN Homo sapiens 3 0.7590
Dihydroorotate dehydrogenase (quinone), mitochondrial Q08210 PYRD_PLAF7 Plasmodium falciparum 3 0.7562
glutaryl-CoA dehydrogenase (ETF) Q3JP94 Q3JP94_BURP1 Burkholderia pseudomallei 3 0.7558
GCN5-related N-acetyltransferase B1YEL6 B1YEL6_EXIS2 Exiguobacterium sibiricum 3 0.7551
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.7551
NADPH-dependent 7-cyano-7-deazaguanine reductase Q9KTK0 QUEF_VIBCH Vibrio cholerae serotype O1 3 0.7542
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7513
Polyprotein Q80J95 Q80J95_9CALI Murine norovirus 1 2 0.7509
Estrogen receptor P03372 ESR1_HUMAN Homo sapiens 2 0.7500
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 3 0.7499
TDP-4-oxo-6-deoxy-alpha-D-glucose-3,4-oxoisomerase Q6T1W8 FDTA_ANETH Aneurinibacillus thermoaerophilus 3 0.7498
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 4 0.7488
3-ketosteroid dehydrogenase Q9RA02 Q9RA02_RHOER Rhodococcus erythropolis 2 0.7482
Peptidyl-prolyl cis-trans isomerase FKBP5 Q13451 FKBP5_HUMAN Homo sapiens 3 0.7459
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7459
Fatty acid-binding protein, adipocyte P15090 FABP4_HUMAN Homo sapiens 2 0.7453
GCN5-related N-acetyltransferase B1YEL6 B1YEL6_EXIS2 Exiguobacterium sibiricum 3 0.7446
D-alanine--D-alanine ligase Q5HEB7 DDL_STAAC Staphylococcus aureus 3 0.7446
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7428
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 2 0.7424
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7422
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7417
Alcohol dehydrogenase E chain P00327 ADH1E_HORSE Equus caballus 3 0.7414
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7408
Dihydroorotate dehydrogenase (quinone), mitochondrial Q02127 PYRD_HUMAN Homo sapiens 3 0.7406
Acetylcholine-binding protein P58154 ACHP_LYMST Lymnaea stagnalis 3 0.7402
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7399
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7387
Fructose-1,6-bisphosphatase 1 P00636 F16P1_PIG Sus scrofa 3 0.7386
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7379
ADP-ribosylation factor 1 P84077 ARF1_HUMAN Homo sapiens 3 0.7367
Bromodomain-containing protein 4 O60885 BRD4_HUMAN Homo sapiens 3 0.7350
Cyclin-dependent kinase 2 P24941 CDK2_HUMAN Homo sapiens 3 0.7350
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7332
Thiamine-phosphate synthase P39594 THIE_BACSU Bacillus subtilis 3 0.7303
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7292
3-phosphoinositide-dependent protein kinase 1 O15530 PDPK1_HUMAN Homo sapiens 3 0.7282
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 2 0.7281
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7269
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 2 0.7259
Bifunctional dihydrofolate reductase-thymidylate synthase P13922 DRTS_PLAFK Plasmodium falciparum 2 0.7226
Vitamin D-binding protein P02774 VTDB_HUMAN Homo sapiens 2 0.7224
cGMP-dependent protein kinase 2 Q13237 KGP2_HUMAN Homo sapiens 2 0.7211
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7210
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 3 0.7206
Fibroblast growth factor receptor 1 P11362 FGFR1_HUMAN Homo sapiens 3 0.7200
Glutathione S-transferase A1 P08263 GSTA1_HUMAN Homo sapiens 2 0.7194
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 2 0.7153
Biflaviolin synthase CYP158A2 Q9FCA6 C1582_STRCO Streptomyces coelicolor / M145) 3 0.7148
Nitric oxide synthase, inducible P29477 NOS2_MOUSE Mus musculus 3 0.7142
Protein LlR18A P52778 L18A_LUPLU Lupinus luteus 2 0.7136
Gag-Pol polyprotein P04585 POL_HV1H2 Human immunodeficiency virus type 1 group M subtype B 4 0.7117
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.7111
Nitric oxide synthase 1 P29476 NOS1_RAT Rattus norvegicus 3 0.7099
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7090
Queuine tRNA-ribosyltransferase P28720 TGT_ZYMMO Zymomonas mobilis subsp. mobilis 3 0.7078
Cytidine and deoxycytidylate deaminase zinc-binding region Q82Y41 Q82Y41_NITEU Nitrosomonas europaea 3 0.7069
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7062
Eugenol synthase 1 Q15GI4 EGS1_OCIBA Ocimum basilicum 3 0.7058
GMP reductase Q81JJ9 GUAC_BACAN Bacillus anthracis 2 0.7045
Genome polyprotein P26663 POLG_HCVBK Hepatitis C virus genotype 1b 3 0.7031
Chitinase A Q9AMP1 Q9AMP1_VIBHA Vibrio harveyi 2 0.7028
cGMP-dependent protein kinase 1 Q13976 KGP1_HUMAN Homo sapiens 2 0.7026
Pheromone-binding protein ASP1 Q9U9J6 Q9U9J6_APIME Apis mellifera 2 0.7023
Liver carboxylesterase 1 P23141 EST1_HUMAN Homo sapiens 3 0.7022
Phenazine biosynthesis protein A/B Q396C9 Q396C9_BURL3 Burkholderia lata 2 0.7016

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