Cocculoside - Compound Card

Cocculoside

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Cocculoside

Structure
Zoomed Structure
  • Family: Plantae - Loganiaceae
  • Kingdom: Plantae
  • Class: Iridoid
Canonical Smiles COC(C[C@@H]1[C@H](C=C)[C@H](OC=C1C(=O)OC1C[C@H]2[C@@H]([C@H]1C)C(OC=C2C(=O)OC)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)OC
InChI InChI=1S/C35H52O20/c1-6-14-15(8-22(46-3)47-4)17(11-49-32(14)54-34-28(42)26(40)24(38)20(9-36)52-34)31(45)51-19-7-16-18(30(44)48-5)12-50-33(23(16)13(19)2)55-35-29(43)27(41)25(39)21(10-37)53-35/h6,11-16,19-29,32-43H,1,7-10H2,2-5H3/t13-,14-,15+,16+,19?,20+,21+,23+,24+,25+,26-,27-,28+,29+,32+,33?,34-,35-/m0/s1
InChIKey DNZCAZQBJHUVDX-YVZKITKGSA-N
Formula C35H52O20
HBA 20
HBD 8
MW 792.78
Rotatable Bonds 14
TPSA 288.28
LogP -3.12
Number Rings 5
Number Aromatic Rings 0
Heavy Atom Count 55
Formal Charge 0
Fraction CSP3 0.77
Exact Mass 792.31
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Strychnos cocculoides Loganiaceae Plantae 1040870

Showing of synonyms

  • Sunghwa F, Koketsu M. (2009). Phenolic and bis-iridoid glycosides from Strychnos cocculoides.. Natural Product Research,2009,23(15),1408-4015. [View] [PubMed]
Pubchem: 102024976

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OC(CC2)OC=C2C(=O)OC(C3)CC(C34)C(OC=C4)OC5CCCCO5

Level: 3

Mol. Weight: 792.78 g/mol

Structure

SMILES: C1CCOC=C1C(=O)OC(C2)CC(C23)C(OC=C3)OC4CCCCO4

Level: 2

Mol. Weight: 792.78 g/mol

Structure

SMILES: C1=COCC(C12)CC(C2)OC(=O)C3=COC(CC3)OC4CCCCO4

Level: 2

Mol. Weight: 792.78 g/mol

Structure

SMILES: C1CCOC=C1C(=O)OC(C2)CC(C23)COC=C3

Level: 1

Mol. Weight: 792.78 g/mol

Structure

SMILES: C1CCC(C12)C(OC=C2)OC3CCCCO3

Level: 1

Mol. Weight: 792.78 g/mol

Structure

SMILES: O1C=CCCC1OC2CCCCO2

Level: 1

Mol. Weight: 792.78 g/mol

Structure

SMILES: C1CCC(C12)COC=C2

Level: 0

Mol. Weight: 792.78 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 792.78 g/mol

Structure

SMILES: C1=COCCC1

Level: 0

Mol. Weight: 792.78 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.3
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
15.650
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
2805.34

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.760
Plasma Protein Binding
62.13
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
4.820
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-69.320
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.660
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
7.750
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-5093059.850
Rat (Acute)
3.470
Rat (Chronic Oral)
5.310
Fathead Minnow
6436.300
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
568303.170
Hydration Free Energy
-2.920
Log(D) at pH=7.4
0.570
Log(P)
-1.56
Log S
-1.88
Log(Vapor Pressure)
-18593.71
Melting Point
199.85
pKa Acid
-90.55
pKa Basic
1.04
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8952
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8952
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7810
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7810
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.7125
Aldos-2-ulose dehydratase P84193 AUD_PHACH Phanerodontia chrysosporium 3 0.7125

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