5-alpha-spirost-25(27)-ene-1-beta,3-beta-diol-1-O-alpha-L-rhamnopyranosyl-(1→2)-(4-O-sulphato)-beta-D-fucopyranoside - Compound Card

5-alpha-spirost-25(27)-ene-1-beta,3-beta-diol-1-O-alpha-L-rhamnopyranosyl-(1→2)-(4-O-sulphato)-beta-D-fucopyranoside

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5-alpha-spirost-25(27)-ene-1-beta,3-beta-diol-1-O-alpha-L-rhamnopyranosyl-(1→2)-(4-O-sulphato)-beta-D-fucopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Agavaceae
  • Kingdom: Plantae
  • Class: Steroid
    • Subclass: Sterol Glycoside
Canonical Smiles O[C@@H]1CC2CCC3C([C@]2([C@@H](C1)OC1OC(C)C(C(C1OC1OC(C)C(C(C1O)O)O)O)OS(=O)(=O)O)C)CC[C@]1(C3CC2C1[C@@H]([C@]1(O2)CCC(=C)CO1)C)C
InChI InChI=1S/C39H62O15S/c1-17-9-12-39(48-16-17)18(2)28-26(53-39)15-25-23-8-7-21-13-22(40)14-27(38(21,6)24(23)10-11-37(25,28)5)51-36-34(32(44)33(20(4)50-36)54-55(45,46)47)52-35-31(43)30(42)29(41)19(3)49-35/h18-36,40-44H,1,7-16H2,2-6H3,(H,45,46,47)/t18-,19?,20?,21?,22+,23?,24?,25?,26?,27+,28?,29?,30?,31?,32?,33?,34?,35?,36?,37-,38-,39+/m0/s1
InChIKey HTKRFJPQRVGJNB-JAMAEGAGSA-N
Formula C39H62O15S
HBA 14
HBD 6
MW 802.98
Rotatable Bonds 6
TPSA 220.13
LogP 2.22
Number Rings 8
Number Aromatic Rings 0
Heavy Atom Count 55
Formal Charge 0
Fraction CSP3 0.95
Exact Mass 802.38
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Cordyline fruticosa Agavaceae Plantae 39501

Showing of synonyms

  • Fouedjou RT, Teponno RB, et al. (2014). Steroidal saponins from the leaves of Cordyline fruticosa (L.) A. Chev. and their cytotoxic and antimicrobial activity. Phytochemistry Letters, 2014, 7, 62-68. [View]

No compound-protein relationship available.

Structure

SMILES: O1CC(=C)CCC12CC3C4C(CC3O2)C5C(CC4)C6C(CC5)CCCC6OC(OCCC7)C7OC8CCCCO8

Level: 2

Mol. Weight: 802.98 g/mol

Structure

SMILES: O1CC(=C)CCC12CC3C4C(CC3O2)C5C(CC4)C6C(CC5)CCCC6OC7CCCCO7

Level: 1

Mol. Weight: 802.98 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 802.98 g/mol

Structure

SMILES: O1CC(=C)CCC12CC3C4C(CC3O2)C5C(CC4)C6C(CC5)CCCC6

Level: 0

Mol. Weight: 802.98 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 802.98 g/mol

Cytotoxic

Absorption

Caco-2 (logPapp)
-5.98
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
18.96
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
3293.32

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.95
Plasma Protein Binding
62.06
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Inhibitor
OATP1B3
Inhibitor

Excretion

Clearance
-0.74
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-82.33
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Toxic
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-1.08
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
6.99
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-5979687.89
Rat (Acute)
2.73
Rat (Chronic Oral)
3.74
Fathead Minnow
7552.97
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
669213.95
Hydration Free Energy
-2.92
Log(D) at pH=7.4
3.03
Log(P)
0.66
Log S
-2.17
Log(Vapor Pressure)
-21963.73
Melting Point
226.37
pKa Acid
-118.29
pKa Basic
4.33
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7175
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7175
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7009
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7009

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