Rauvocerebroside - Compound Card

Rauvocerebroside

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Rauvocerebroside

Structure
Zoomed Structure
  • Family: Plantae - Apocynaceae
  • Kingdom: Plantae
  • Class: Lipid
    • Subclass: Glycocerebroside
Canonical Smiles CCCCCCCC/C=C\C/C=C(/[C@H]([C@@H](NC(=O)[C@@H](CCCCCCCC)O)CO[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)\OC
InChI InChI=1S/C39H71NO15/c1-4-6-8-10-12-13-14-15-17-19-21-27(51-3)36(55-39-35(49)33(47)31(45)29(23-42)54-39)25(40-37(50)26(43)20-18-16-11-9-7-5-2)24-52-38-34(48)32(46)30(44)28(22-41)53-38/h15,17,21,25-26,28-36,38-39,41-49H,4-14,16,18-20,22-24H2,1-3H3,(H,40,50)/b17-15-,27-21-/t25-,26+,28+,29+,30+,31+,32-,33-,34+,35+,36-,38+,39-/m0/s1
InChIKey FSPAHHMKNYDDKJ-KRYMGODDSA-N
Formula C39H71NO15
HBA 15
HBD 10
MW 793.99
Rotatable Bonds 28
TPSA 257.32
LogP 0.81
Number Rings 2
Number Aromatic Rings 0
Heavy Atom Count 55
Formal Charge 0
Fraction CSP3 0.87
Exact Mass 793.48
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Rauvolfia macrophylla Apocynaceae Plantae 4059

Showing of synonyms

  • Kaoke MD, Sema DK, et al. (2020). A new cytotoxic glycocerebroside from Rauvolfia macrophylla Stapf. Natural products chemistry & research,2020, 8, 1-5. [View]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OCCCOC2CCCCO2

Level: 1

Mol. Weight: 793.99 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 793.99 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-6.3
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
4.92
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
1427.1

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.86
Plasma Protein Binding
82.05
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
0.05
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-33.78
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.78
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
6.06
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2589844.05
Rat (Acute)
2.58
Rat (Chronic Oral)
4.59
Fathead Minnow
3277.59
Respiratory Disease
Safe
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
287150.15
Hydration Free Energy
-2.92
Log(D) at pH=7.4
2.32
Log(P)
3.98
Log S
-3.06
Log(Vapor Pressure)
-9348.36
Melting Point
100.66
pKa Acid
-28.63
pKa Basic
5.67
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Small heat shock protein StHsp14.0 Q970D9 Q970D9_SULTO Sulfurisphaera tokodaii 3 0.7025

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