Affinisine - Compound Card

Affinisine

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Affinisine

Structure
Zoomed Structure
  • Family: Plantae - Apocynaceae
  • Kingdom: Plantae
  • Class: Alkaloid
    • Subclass: Monoterpenoid Indole Alkaloid
Canonical Smiles C/C=C\1/CN2[C@@H]3C([C@H]1C[C@H]2c1c(C3)c2c(n1C)cccc2)CO
InChI InChI=1S/C20H24N2O/c1-3-12-10-22-18-9-15-13-6-4-5-7-17(13)21(2)20(15)19(22)8-14(12)16(18)11-23/h3-7,14,16,18-19,23H,8-11H2,1-2H3/b12-3-/t14-,16?,18-,19-/m0/s1
InChIKey UVWQYWHKTZABSO-FZGOZLGSSA-N
Formula C20H24N2O
HBA 3
HBD 1
MW 308.43
Rotatable Bonds 1
TPSA 28.4
LogP 3.03
Number Rings 6
Number Aromatic Rings 2
Heavy Atom Count 23
Formal Charge 0
Fraction CSP3 0.5
Exact Mass 308.19
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Tabernaemontana contorta Apocynaceae Plantae 761060

Showing of synonyms

  • Foudjo Melacheu G, Mfotie Njoya E, et al. (2021). Contortamide, a new anti-colon cancer cerebroside and other constituents from Tabernaemontana contorta Stapf (Apocynaceae). Natural product research,2021, 35(11), 1757-1765. [View] [PubMed]
Pubchem: 6325075
Kegg Ligand: C09022
Chebi: 2503
Nmrshiftdb2: 60064427
Metabolights: MTBLC2503

No compound-protein relationship available.

Structure

SMILES: C=C(C1)C(C2)CC(C3)N1C2c(c3c45)[nH]c4cccc5

Level: 0

Mol. Weight: 308.43 g/mol

Anti-colon cancer

Absorption

Caco-2 (logPapp)
-4.76
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.85
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-1.91

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.73
Plasma Protein Binding
59.45
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Inhibitor
CYP 2D6 Substrate
Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.61
Organic Cation Transporter 2
Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Toxic
Bioconcentration Factor
0.38
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Toxic
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.66
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
5.66
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-1.76
Rat (Acute)
3.1
Rat (Chronic Oral)
1.78
Fathead Minnow
4.43
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
434.76
Hydration Free Energy
-5.12
Log(D) at pH=7.4
1.85
Log(P)
2.94
Log S
-2.88
Log(Vapor Pressure)
-8.15
Melting Point
188.01
pKa Acid
10.57
pKa Basic
8.57
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.8992
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 3 0.8523
2,7-dihydroxy-5-methyl-1-naphthoate 7-O-methyltransferase Q84HC8 NCSB1_STRCZ Streptomyces carzinostaticus 3 0.8433
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.8178
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.8119
3-alpha-hydroxysteroid dehydrogenase P23457 DIDH_RAT Rattus norvegicus 2 0.7838
Troponin C, slow skeletal and cardiac muscles P63316 TNNC1_HUMAN Homo sapiens 3 0.7798
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 2 0.7751
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7611
Aldo-keto reductase family 1 member B1 P15121 ALDR_HUMAN Homo sapiens 3 0.7587
Aldo-keto reductase family 1 member B10 O60218 AK1BA_HUMAN Homo sapiens 3 0.7548
Sulfotransferase 2B1 O00204 ST2B1_HUMAN Homo sapiens 2 0.7541
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7399
Bromodomain-containing protein 2 P25440 BRD2_HUMAN Homo sapiens 2 0.7275
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 3 0.7244
Casein kinase II subunit alpha P68400 CSK21_HUMAN Homo sapiens 3 0.7234
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7203
Serine/threonine-protein kinase pim-1 P11309 PIM1_HUMAN Homo sapiens 2 0.7203
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 3 0.7157
Carbonic anhydrase 4 Q64444 CAH4_MOUSE Mus musculus 2 0.7136
Aldo-keto reductase family 1 member B1 P80276 ALDR_PIG Sus scrofa 3 0.7055

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