(22R,25R)-26-[(beta-D-glucopyranosyl)oxy]-16beta,22-dihydroxycholest-5-en-3beta-yl O-alpha-L-rhamnopyranosyl-(1→2)-beta-D-glucopyranoside - Compound Card

(22R,25R)-26-[(beta-D-glucopyranosyl)oxy]-16beta,22-dihydroxycholest-5-en-3beta-yl O-alpha-L-rhamnopyranosyl-(1→2)-beta-D-glucopyranoside

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(22R,25R)-26-[(beta-D-glucopyranosyl)oxy]-16beta,22-dihydroxycholest-5-en-3beta-yl O-alpha-L-rhamnopyranosyl-(1→2)-beta-D-glucopyranoside

Structure
Zoomed Structure
  • Family: Plantae - Arecaceae
  • Kingdom: Plantae
  • Class: Saponin
    • Subclass: Triterpenoid Saponin
Canonical Smiles C1[C@@H](CC2=CC[C@@H]3[C@@H]([C@]2(C1)C)CC[C@]1([C@H]3C[C@@H](C1[C@@H](C(CC[C@H](COC1[C@H]([C@H]([C@@H](C(O1)CO)O)O)O)C)C1[C@H]([C@H]([C@@H](C(O1)CO)O)O)OC1[C@H]([C@H]([C@H](C(O1)C)O)O)O)C)O)C)OO
InChI InChI=1S/C45H76O18/c1-19(18-58-42-38(55)36(53)33(50)30(17-47)61-42)6-8-24(40-41(37(54)34(51)29(16-46)60-40)62-43-39(56)35(52)32(49)21(3)59-43)20(2)31-28(48)15-27-25-9-7-22-14-23(63-57)10-12-44(22,4)26(25)11-13-45(27,31)5/h7,19-21,23-43,46-57H,6,8-18H2,1-5H3/t19-,20-,21?,23+,24?,25-,26+,27+,28+,29?,30?,31?,32+,33-,34-,35+,36+,37+,38+,39+,40?,41+,42?,43?,44+,45+/m1/s1
InChIKey AUBURRGMJUSMGH-ULHJWARASA-N
Formula C45H76O18
HBA 18
HBD 12
MW 905.09
Rotatable Bonds 14
TPSA 298.14
LogP -0.43
Number Rings 7
Number Aromatic Rings 0
Heavy Atom Count 63
Formal Charge 0
Fraction CSP3 0.96
Exact Mass 904.5
Number of Lipinski Rule Violations 3
# Species Family Kingdom NCBI Taxonomy ID
1 Raphia farinifera Arecaceae Plantae 93338

Showing of synonyms

  • Tapondjou L, Siems K, et al. (2015). Steroidal saponins from the mesocarp of the fruits of Raphia farinifera (Arecaceae) and their cytotoxic activity. Natural Product Communications, 2015, 10(11), 1941-1944. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: O1CCCCC1OCCCCC(C2C(CCCO2)OC3CCCCO3)CC(CC4)C(C45)CCC6C5CC=C7C6CCCC7

Level: 3

Mol. Weight: 905.09 g/mol

Structure

SMILES: O1CCCCC1OCCCCC(C2CCCCO2)CC(CC3)C(C34)CCC5C4CC=C6C5CCCC6

Level: 2

Mol. Weight: 905.09 g/mol

Structure

SMILES: O1CCCCC1OC(CCCO2)C2CCC3CCC(C34)C5C(CC4)C6C(=CC5)CCCC6

Level: 2

Mol. Weight: 905.09 g/mol

Structure

SMILES: O1CCCCC1OCCCCCC2C(CCCO2)OC3CCCCO3

Level: 2

Mol. Weight: 905.09 g/mol

Structure

SMILES: O1CCCCC1OCCCCCCC2CCC(C23)C4C(CC3)C5C(=CC4)CCCC5

Level: 1

Mol. Weight: 905.09 g/mol

Structure

SMILES: O1CCCCC1CCC2CCC(C23)C4C(CC3)C5C(=CC4)CCCC5

Level: 1

Mol. Weight: 905.09 g/mol

Structure

SMILES: O1CCCCC1CCCCCOC2CCCCO2

Level: 1

Mol. Weight: 905.09 g/mol

Structure

SMILES: C1OCCCC1OC2CCCCO2

Level: 1

Mol. Weight: 905.09 g/mol

Structure

SMILES: C1CCC(C12)CCC3C2CC=C4C3CCCC4

Level: 0

Mol. Weight: 905.09 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 905.09 g/mol

Cytotoxic

Absorption

Caco-2 (logPapp)
-6.6
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
1033.93
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
135937.89

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.77
Plasma Protein Binding
83.13
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
1.56
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Toxic
Bee
Toxic
Bioconcentration Factor
-3156.67
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.71
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
4.44
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-246721265.38
Rat (Acute)
4.03
Rat (Chronic Oral)
4.23
Fathead Minnow
311441.22
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Toxic
SR-p53
Safe

General Properties

Boiling Point
27745727.05
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-1.82
Log(P)
0.36
Log S
-2.43
Log(Vapor Pressure)
-913476.26
Melting Point
234.38
pKa Acid
-6567.86
pKa Basic
-20.59
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.8124
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.8055
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 3 0.7796
ADP-ribosylation factor 1 P84080 ARF1_BOVIN Bos taurus 3 0.7753
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 3 0.7266
17-beta-hydroxysteroid dehydrogenase type 1 P14061 DHB1_HUMAN Homo sapiens 3 0.7068

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