6-oxo-3,4,15,16-bis-epoxy-8H-cleroda-13(16),14-dien-20,12-olide - Compound Card

6-oxo-3,4,15,16-bis-epoxy-8H-cleroda-13(16),14-dien-20,12-olide

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6-oxo-3,4,15,16-bis-epoxy-8H-cleroda-13(16),14-dien-20,12-olide

Structure
Zoomed Structure
  • Family: Asteraceae-Compositae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Neo-Clerodane Diterpenoid
Canonical Smiles C1[C@H]2[C@]([C@@]3([C@H](C1)[C@]1([C@@H](CC3=O)C)C[C@H](OC1=O)c1ccoc1)C)(C)O2
InChI InChI=1S/C20H24O5/c1-11-8-15(21)18(2)14(4-5-16-19(18,3)25-16)20(11)9-13(24-17(20)22)12-6-7-23-10-12/h6-7,10-11,13-14,16H,4-5,8-9H2,1-3H3/t11-,13+,14+,16+,18-,19+,20-/m1/s1
InChIKey UFHYOYGCHODDKI-RPKDGOJISA-N
Formula C20H24O5
HBA 5
HBD 0
MW 344.41
Rotatable Bonds 1
TPSA 69.04
LogP 3.44
Number Rings 5
Number Aromatic Rings 1
Heavy Atom Count 25
Formal Charge 0
Fraction CSP3 0.7
Exact Mass 344.16
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Conyza pyrrhopappa Asteraceae-Compositae Plantae 72919

Showing of synonyms

  • Bitchagno GTM, Schüffler A, et al. (2021). Neo-clerodane diterpenoids from Conyza pyrrhopappa Sch.Bip. ex A.Rich.. Nat Prod Res. 2021, 35(19),3210-3219. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C1CC(O2)C2C(C(=O)CC3)C1C34C(=O)OC(C4)c5ccoc5

Level: 1

Mol. Weight: 302.33 g/mol

Structure

SMILES: C1CC(O2)C2C(C(=O)CC3)C1C34C(=O)OCC4

Level: 0

Mol. Weight: 236.27 g/mol

Structure

SMILES: c1ccoc1

Level: 0

Mol. Weight: 68.07 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.15
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.81
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-2.04

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.54
Plasma Protein Binding
40.74
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
14.49
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
0.61
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.19
Liver Injury II
Safe
hERG Blockers
Safe
Daphnia Maga
5.46
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-3.41
Rat (Acute)
3.41
Rat (Chronic Oral)
1.62
Fathead Minnow
3.84
Respiratory Disease
Toxic
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Toxic
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
425.78
Hydration Free Energy
-5.15
Log(D) at pH=7.4
2.1
Log(P)
2.38
Log S
-3.77
Log(Vapor Pressure)
-7.65
Melting Point
196.97
pKa Acid
5.95
pKa Basic
4.66
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.9147
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.9047
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial Q33862 Q33862_ASCSU Ascaris suum 3 0.8800
Probable esterase KAI2 Q9SZU7 KAI2_ARATH Arabidopsis thaliana 3 0.8138
Cytochrome P450 S6BVH1 S6BVH1_RHOER Rhodococcus erythropolis 3 0.8072
Probable NDP-rhamnosyltransferase Q9ALM8 Q9ALM8_SACSN Saccharopolyspora spinosa 3 0.8067
Integrin alpha-L P20701 ITAL_HUMAN Homo sapiens 3 0.7947
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7865
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7837
Peptidyl-prolyl cis-trans isomerase FKBP1A P62942 FKB1A_HUMAN Homo sapiens 3 0.7812
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7805
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7782
Aldo-keto reductase family 1 member C1 Q04828 AK1C1_HUMAN Homo sapiens 2 0.7761
Lactoylglutathione lyase Q9CPU0 LGUL_MOUSE Mus musculus 2 0.7748
Sarcoplasmic/endoplasmic reticulum calcium ATPase 1 P04191 AT2A1_RABIT Oryctolagus cuniculus 3 0.7724
Aldo-keto reductase family 1 member D1 P51857 AK1D1_HUMAN Homo sapiens 2 0.7721
Virginiamycin A acetyltransferase P26839 VATA_STAAU Staphylococcus aureus 4 0.7717
Retinol dehydratase Q26490 Q26490_SPOFR Spodoptera frugiperda 3 0.7638
Abscisic acid receptor PYL3 Q9SSM7 PYL3_ARATH Arabidopsis thaliana 3 0.7615
Corticosteroid-binding globulin P08185 CBG_HUMAN Homo sapiens 3 0.7609
cGMP-dependent 3',5'-cyclic phosphodiesterase O00408 PDE2A_HUMAN Homo sapiens 2 0.7547
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 2 0.7523
Nuclear receptor subfamily 1 group I member 2 O75469 NR1I2_HUMAN Homo sapiens 3 0.7500
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7491
Soluble acetylcholine receptor Q8WSF8 Q8WSF8_APLCA Aplysia californica 3 0.7485
Aldo-keto reductase family 1 member C2 P52895 AK1C2_HUMAN Homo sapiens 2 0.7470
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7459
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 2 0.7454
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7453
Retinol-binding protein 1 P09455 RET1_HUMAN Homo sapiens 3 0.7451
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7447
NAD(P) transhydrogenase subunit alpha part 1 Q2RSB2 PNTAA_RHORT Rhodospirillum rubrum 3 0.7428
3-ketosteroid dehydrogenase Q9RA02 Q9RA02_RHOER Rhodococcus erythropolis 2 0.7418
Aldo-keto reductase family 1 member C3 P42330 AK1C3_HUMAN Homo sapiens 2 0.7418
Sex hormone-binding globulin P04278 SHBG_HUMAN Homo sapiens 2 0.7413
Bifunctional dihydrofolate reductase-thymidylate synthase P13922 DRTS_PLAFK Plasmodium falciparum 2 0.7396
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 2 0.7392
Ferrochelatase, mitochondrial P22830 HEMH_HUMAN Homo sapiens 3 0.7385
Succinate dehydrogenase flavoprotein subunit P0AC41 SDHA_ECOLI Escherichia coli 3 0.7361
Carbonic anhydrase 2 P00918 CAH2_HUMAN Homo sapiens 2 0.7360
Fatty acid-binding protein, intestinal P12104 FABPI_HUMAN Homo sapiens 3 0.7358
Beta-1 adrenergic receptor P07700 ADRB1_MELGA Meleagris gallopavo 3 0.7338
High affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A O76083 PDE9A_HUMAN Homo sapiens 2 0.7335
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7304
Retinol-binding protein 1 P02696 RET1_RAT Rattus norvegicus 3 0.7270
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7260
NADPH-dependent oxidoreductase 2-alkenal reductase Q39172 AER_ARATH Arabidopsis thaliana 2 0.7245
prolyl oligopeptidase Q9X6R4 Q9X6R4_AERCA Aeromonas caviae 2 0.7233
Pantothenate synthetase P9WIL5 PANC_MYCTU Mycobacterium tuberculosis 2 0.7233
Beta-secretase 1 P56817 BACE1_HUMAN Homo sapiens 2 0.7228
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7226
Aldo-keto reductase family 1 member B1 P80276 ALDR_PIG Sus scrofa 2 0.7211
Bromodomain adjacent to zinc finger domain protein 2B Q9UIF8 BAZ2B_HUMAN Homo sapiens 2 0.7164
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 2 0.7151
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 2 0.7114
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7107
Lanosterol 14-alpha-demethylase Q385E8 Q385E8_TRYB2 Trypanosoma brucei brucei 3 0.7085
Lethal(3)malignant brain tumor-like protein 1 Q9Y468 LMBL1_HUMAN Homo sapiens 3 0.7069
Heat shock protein HSP 90-alpha P07900 HS90A_HUMAN Homo sapiens 2 0.7064
F420-dependent methylenetetrahydromethanopterin dehydrogenase P94951 MTD_METKA Methanopyrus kandleri 2 0.7052
Coagulation factor X P00742 FA10_HUMAN Homo sapiens 2 0.7035
Carbonic anhydrase 1 P00915 CAH1_HUMAN Homo sapiens 2 0.7034
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.7015
NADH:flavin oxidoreductase Sye1 Q8EEC8 Q8EEC8_SHEON Shewanella oneidensis 2 0.7005

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