Esculin - Compound Card

Esculin

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Esculin

Structure
Zoomed Structure
  • Family: Plantae - Asteraceae
  • Kingdom: Plantae
  • Class: Coumarin
    • Subclass: Coumarin Glycoside
Canonical Smiles OC[C@H]1O[C@@H](Oc2cc3ccc(=O)oc3cc2O)[C@@H]([C@H]([C@@H]1O)O)O
InChI InChI=1S/C15H16O9/c16-5-10-12(19)13(20)14(21)15(24-10)23-9-3-6-1-2-11(18)22-8(6)4-7(9)17/h1-4,10,12-17,19-21H,5H2/t10-,12-,13+,14-,15-/m1/s1
InChIKey XHCADAYNFIFUHF-TVKJYDDYSA-N
Formula C15H16O9
HBA 9
HBD 5
MW 340.28
Rotatable Bonds 3
TPSA 149.82
LogP -1.32
Number Rings 3
Number Aromatic Rings 2
Heavy Atom Count 24
Formal Charge 0
Fraction CSP3 0.4
Exact Mass 340.08
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Erigeron floribundus Asteraceae Plantae 91244

Showing of synonyms

  • Berto C, Maggi F, et al. (2014). Phenolic constituents of Erigeron floribundus (Asteraceae), a Cameroonian medicinal plant.. Natural Product Communications, 2014, 9(12), 1691-1964. [View] [PubMed]
Pubchem: 5281417
Kegg Ligand: C09264
Chebi: 4853
Nmrshiftdb2: 60023901
Metabolights: MTBLC4853
Drugbank: DB13155
Pdb Ligand: 7OU
Bindingdb: 50480261
CPRiL: 51603
Structure

SMILES: c1cc(=O)oc(c12)ccc(c2)OC3CCCCO3

Level: 1

Mol. Weight: 340.28 g/mol

Structure

SMILES: c1cccc(c12)oc(=O)cc2

Level: 0

Mol. Weight: 340.28 g/mol

Structure

SMILES: C1CCOCC1

Level: 0

Mol. Weight: 340.28 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.73
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Non-Absorbed
Madin-Darby Canine Kidney
-5.280
Human Oral Bioavailability 50%
Non-Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Non-Substrate
Skin Permeability
-0.82

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.760
Plasma Protein Binding
72.8
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Non-Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
9.590
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Safe
Bioconcentration Factor
-1.710
Biodegradation
Toxic
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
0.830
Liver Injury II
Toxic
hERG Blockers
Safe
Daphnia Maga
4.520
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Safe
T. Pyriformis
-2.620
Rat (Acute)
2.010
Rat (Chronic Oral)
3.470
Fathead Minnow
3.920
Respiratory Disease
Safe
Skin Sensitisation
Toxic
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
490.120
Hydration Free Energy
-15.270
Log(D) at pH=7.4
-0.570
Log(P)
-1.44
Log S
-2.35
Log(Vapor Pressure)
-11.89
Melting Point
192.91
pKa Acid
4.52
pKa Basic
6.67
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 3 0.9767
CREB-binding protein Q92793 CBP_HUMAN Homo sapiens 3 0.8981
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8939
Mitogen-activated protein kinase 1 P28482 MK01_HUMAN Homo sapiens 3 0.8925
Flavin-dependent monooxygenase Q93L51 TETX_BACT4 Bacteroides thetaiotaomicron 3 0.8881
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.8881
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8842
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.8767
DNA polymerase III subunit epsilon P03007 DPO3E_ECOLI Escherichia coli 3 0.8690
3',5'-cyclic-AMP phosphodiesterase 4D Q08499 PDE4D_HUMAN Homo sapiens 3 0.8645
Tyrosine-protein kinase JAK2 O60674 JAK2_HUMAN Homo sapiens 3 0.8338
Tetracycline repressor protein class D P0ACT4 TETR4_ECOLX Escherichia coli 3 0.8223
Serpin domain-containing protein H0ZQY2 H0ZQY2_TAEGU Taeniopygia guttata 3 0.8130
L-lactate dehydrogenase A chain P04642 LDHA_RAT Rattus norvegicus 3 0.8044
Acetylcholinesterase P21836 ACES_MOUSE Mus musculus 2 0.7999
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7900
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7865
Endothiapepsin P11838 CARP_CRYPA Cryphonectria parasitica 3 0.7845
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase Q9TQS6 DHDH_MACFA Macaca fascicularis 3 0.7838
beta-glucosidase Q92AS9 Q92AS9_LISIN Listeria innocua serovar 6a 3 0.7824
Acetylcholinesterase P04058 ACES_TETCF Tetronarce californica 3 0.7721
Poly [ADP-ribose] polymerase 1 P26446 PARP1_CHICK Gallus gallus 3 0.7663
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7654
AGAP003309-PA A0A1U7F4W2 A0A1U7F4W2_ANOGA Anopheles gambiae 3 0.7638
Pancreatic alpha-amylase P04746 AMYP_HUMAN Homo sapiens 3 0.7619
Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase Q05603 COBT_SALTY Salmonella typhimurium 2 0.7607
Steroid Delta-isomerase P00947 SDIS_COMTE Comamonas testosteroni 2 0.7591
Polyribonucleotide nucleotidyltransferase A7ZS61 PNP_ECO24 Escherichia coli O139:H28 3 0.7560
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7535
NADPH dehydrogenase 1 Q02899 OYE1_SACPS Saccharomyces pastorianus 3 0.7513
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7512
Steroid Delta-isomerase P07445 SDIS_PSEPU Pseudomonas putida 2 0.7512
Basic phospholipase A2 VRV-PL-VIIIa P59071 PA2B8_DABRR Daboia russelii 3 0.7463
Polymerase acidic protein C3W5S0 C3W5S0_I09A0 Influenza A virus 2 0.7454
Adenosine 5'-monophosphoramidase HINT1 P80912 HINT1_RABIT Oryctolagus cuniculus 3 0.7414
HTH-type transcriptional repressor PurR P0ACP7 PURR_ECOLI Escherichia coli 3 0.7409
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7370
Mitochondrial poly(A) polymerase F1NBW0 F1NBW0_CHICK Gallus gallus 2 0.7360
Tyrosine-protein kinase SYK P43405 KSYK_HUMAN Homo sapiens 3 0.7301
Beta-galactoside-specific lectin 4 Q6ITZ3 ML4_VISAL Viscum album 2 0.7296
HD domain protein Q836G9 Q836G9_ENTFA Enterococcus faecalis 3 0.7291
Serine/threonine-protein kinase Chk1 O14757 CHK1_HUMAN Homo sapiens 3 0.7277
Endoplasmin P41148 ENPL_CANLF Canis lupus familiaris 3 0.7248
LIM domain kinase 1 P53667 LIMK1_HUMAN Homo sapiens 2 0.7231
Prothrombin P00734 THRB_HUMAN Homo sapiens 3 0.7214
Cathepsin S P25774 CATS_HUMAN Homo sapiens 3 0.7211
Nucleoside diphosphate kinase A 2 P52175 NDKA2_BOVIN Bos taurus 3 0.7177
Histone-lysine N-methyltransferase EHMT1 Q9H9B1 EHMT1_HUMAN Homo sapiens 2 0.7176
Gag-Pol polyprotein P04584 POL_HV2RO Human immunodeficiency virus type 2 subtype A 3 0.7163
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.7142
Glucan 1,3-beta-glucosidase P29717 EXG1_CANAL Candida albicans 3 0.7135
NTPase P4 Q94M05 Q94M05_9VIRU Pseudomonas phage phi12 3 0.7115
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 5 0.7076
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 3 0.7056
Glycogen phosphorylase, muscle form P00489 PYGM_RABIT Oryctolagus cuniculus 5 0.7048
Phosphatidylinositol 5-phosphate 4-kinase type-2 beta P78356 PI42B_HUMAN Homo sapiens 3 0.7035
Disks large homolog 1 Q12959 DLG1_HUMAN Homo sapiens 3 0.7026
Uncharacterized protein YML079W Q03629 YMH9_YEAST Saccharomyces cerevisiae 3 0.7026
Pentaerythritol tetranitrate reductase P71278 P71278_ENTCL Enterobacter cloacae 3 0.7026
Ribosyldihydronicotinamide dehydrogenase [quinone] P16083 NQO2_HUMAN Homo sapiens 4 0.7003

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