Cordialin B - Compound Card

Cordialin B

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Cordialin B

Structure
Zoomed Structure
  • Family: Plantae - Boraginaceae
  • Kingdom: Plantae
  • Class: Terpenoid
    • Subclass: Triterpene
Canonical Smiles C/C(=C/C[C@@H](C(O)(C)C)O)/[C@H]1CC[C@@]2([C@@H]1C[C@@H](O)[C@H]1[C@@]2(C)CC[C@@H]2[C@@]31CC[C@](OC3)(C2(C)C)O)C
InChI InChI=1S/C30H50O5/c1-18(8-9-23(32)26(4,5)33)19-10-12-27(6)20(19)16-21(31)24-28(27,7)13-11-22-25(2,3)30(34)15-14-29(22,24)17-35-30/h8,19-24,31-34H,9-17H2,1-7H3/b18-8-/t19-,20-,21-,22+,23+,24+,27-,28-,29-,30+/m1/s1
InChIKey ZEUZPNRYEDEMBZ-UYOFGMGGSA-N
Formula C30H50O5
HBA 5
HBD 4
MW 490.73
Rotatable Bonds 4
TPSA 90.15
LogP 4.81
Number Rings 6
Number Aromatic Rings 0
Heavy Atom Count 35
Formal Charge 0
Fraction CSP3 0.93
Exact Mass 490.37
Number of Lipinski Rule Violations 0
# Species Family Kingdom NCBI Taxonomy ID
1 Cordia batesii Boraginaceae Plantae 1549838

Showing of synonyms

  • BMC chemistry, 2021, et al. (2021). Experimental and computational studies of an antiplasmodial derivative of allantoin. BMC Chem, 2021,15(1),15. [View] [PubMed]
Pubchem: 101288411

No compound-protein relationship available.

Structure

SMILES: C1CCC(CC2)C1C(C2C345)CCC3CC(CC4)OC5

Level: 0

Mol. Weight: 490.73 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-4.95
Human Oral Bioavailability 20%
Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.84
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
-2.21

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Penetrable
Fraction Unbound (Human)
0.99
Plasma Protein Binding
85.49
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
6.9
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-1.5
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.81
Liver Injury II
Safe
hERG Blockers
Toxic
Daphnia Maga
5.69
Micronucleos
Safe
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Safe
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Toxic
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-228.92
Rat (Acute)
4.08
Rat (Chronic Oral)
2.08
Fathead Minnow
3.73
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Safe

General Properties

Boiling Point
454.89
Hydration Free Energy
-2.93
Log(D) at pH=7.4
4.45
Log(P)
4.59
Log S
-5.17
Log(Vapor Pressure)
-9.66
Melting Point
230.58
pKa Acid
8.5
pKa Basic
6.91
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
Protein BRASSINOSTEROID INSENSITIVE 1 O22476 BRI1_ARATH Arabidopsis thaliana 4 0.8364
Protein BRASSINOSTEROID INSENSITIVE 1 O22476 BRI1_ARATH Arabidopsis thaliana 4 0.8008
Protein BRASSINOSTEROID INSENSITIVE 1 O22476 BRI1_ARATH Arabidopsis thaliana 4 0.7934
CmeR Q7B8P6 Q7B8P6_CAMJU Campylobacter jejuni 2 0.7358
Androgen receptor P10275 ANDR_HUMAN Homo sapiens 3 0.7075

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