Staudtianoside B - Compound Card

Staudtianoside B

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Staudtianoside B

Structure
Zoomed Structure
  • Family: Plantae - Celastraceae
  • Kingdom: Plantae
  • Class: Steroid
    • Subclass: Cardenolide
Canonical Smiles O=C1OCC(=C1)[C@H]1CC[C@]2([C@]1(C)C(=O)[C@@H](O)C1[C@@]2(O)C[C@@H]2[C@]3([C@]1(C)C[C@H]1O[C@@]45OCO[C@@H]4C=CO[C@H]5O[C@@H]1[C@@H]3O)O2)O
InChI InChI=1S/C29H34O13/c1-24-8-14-19(40-23-29(41-14)15(4-6-36-23)38-11-39-29)22(33)28(24)16(42-28)9-26(34)20(24)18(31)21(32)25(2)13(3-5-27(25,26)35)12-7-17(30)37-10-12/h4,6-7,13-16,18-20,22-23,31,33-35H,3,5,8-11H2,1-2H3/t13-,14-,15-,16-,18+,19+,20?,22+,23+,24-,25+,26+,27-,28+,29+/m1/s1
InChIKey LTHNUDAASLXDAQ-LKCBDDPXSA-N
Formula C29H34O13
HBA 13
HBD 4
MW 590.58
Rotatable Bonds 1
TPSA 182.97
LogP -1.06
Number Rings 9
Number Aromatic Rings 0
Heavy Atom Count 42
Formal Charge 0
Fraction CSP3 0.79
Exact Mass 590.2
Number of Lipinski Rule Violations 2
# Species Family Kingdom NCBI Taxonomy ID
1 Salacia staudtiana Celastraceae Plantae 662028

Showing of synonyms

  • Kamtcha DW, Tene M, et al. (2018). Cardenolides from the stem bark of Salacia staudtiana.. Fitoterapia,2018, 127, 402-409. [View] [PubMed]

No compound-protein relationship available.

Structure

SMILES: C1OC(=O)C=C1C(CC2)C(C2C3CC(C456)O6)C(=O)CC3C4CC7C(C5)OC8C9(O7)C(C=CO8)OCO9

Level: 1

Mol. Weight: 590.58 g/mol

Structure

SMILES: C123C(O3)CC4C5C(CCC5)C(=O)CC4C1CC6C(C2)OC7C8(O6)C(C=CO7)OCO8

Level: 0

Mol. Weight: 590.58 g/mol

Structure

SMILES: O=C1C=CCO1

Level: 0

Mol. Weight: 590.58 g/mol

No bioactivities available.

Absorption

Caco-2 (logPapp)
-5.45
Human Oral Bioavailability 20%
Non-Bioavailable
Human Intestinal Absorption
Absorbed
Madin-Darby Canine Kidney
-4.78
Human Oral Bioavailability 50%
Bioavailable
P-Glycoprotein Inhibitor
Non-Inhibitor
P-Glycoprotein Substrate
Substrate
Skin Permeability
10.83

Distribution

Blood-Brain Barrier (CNS)
-
Blood-Brain Barrier
Non-Penetrable
Fraction Unbound (Human)
0.56
Plasma Protein Binding
40.61
Steady State Volume of Distribution
-

Metabolism

Breast Cancer Resistance Protein
Non-Inhibitor
CYP 1A2 Inhibitor
Non-Inhibitor
CYP 1A2 Substrate
Non-Substrate
CYP 2C19 Inhibitor
Non-Inhibitor
CYP 2C19 Substrate
Non-Substrate
CYP 2C9 Inhibitor
Non-Inhibitor
CYP 2C9 Substrate
Non-Substrate
CYP 2D6 Inhibitor
Non-Inhibitor
CYP 2D6 Substrate
Non-Substrate
CYP 3A4 Inhibitor
Non-Inhibitor
CYP 3A4 Substrate
Substrate
OATP1B1
Non-Inhibitor
OATP1B3
Non-Inhibitor

Excretion

Clearance
3.87
Organic Cation Transporter 2
Non-Inhibitor
Half-Life of Drug
-

Toxicity

AMES Mutagenesis
Safe
Avian
Safe
Bee
Toxic
Bioconcentration Factor
-2.65
Biodegradation
Safe
Carcinogenesis
Safe
Crustacean
Safe
Liver Injury I (DILI)
Safe
Eye Corrosion
Safe
Eye Irritation
Safe
Maximum Tolerated Dose
-0.12
Liver Injury II
Toxic
hERG Blockers
Toxic
Daphnia Maga
5.22
Micronucleos
Toxic
NR-AhR
Safe
NR-AR
Safe
NR-AR-LBD
Toxic
NR-Aromatase
Safe
NR-ER
Safe
NR-ER-LBD
Safe
NR-GR
Safe
NR-PPAR-gamma
Safe
NR-TR
Toxic
T. Pyriformis
-21415.42
Rat (Acute)
4.68
Rat (Chronic Oral)
3.09
Fathead Minnow
41.61
Respiratory Disease
Toxic
Skin Sensitisation
Safe
SR-ARE
Safe
SR-ATAD5
Safe
SR-HSE
Safe
SR-MMP
Safe
SR-p53
Toxic

General Properties

Boiling Point
431.12
Hydration Free Energy
-2.92
Log(D) at pH=7.4
-0.42
Log(P)
-1.16
Log S
-2.72
Log(Vapor Pressure)
-10.36
Melting Point
211.18
pKa Acid
4.19
pKa Basic
2.65
Protein Name UniProt ID Entry Name Species #Pharmacophore Points Probability (0.7 ≤ Tversky Score ≤ 1.0)
N-alpha-acetyltransferase 50 Q9GZZ1 NAA50_HUMAN Homo sapiens 3 0.7680
Type IV / VI secretion system DotU domain-containing protein Q9KN50 Q9KN50_VIBCH Vibrio cholerae serotype O1 3 0.7049

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